Gene PMN2A_1129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1129 
SymbolrplC 
ID3606517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1616361 
End bp1617017 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID637688000 
Product50S ribosomal protein L3 
Protein accessionYP_292322 
Protein GI72382967 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAG GAATCTTAGG TAAGAAGTTG GGTATGTCCC AACTCTTCGA TGATCAAGGC 
AGAGCCGTTC CAGTCACTTT GATCGAAGCG GGTCCCTGTC GAATCACTCA ATTGAAATCT 
GCTGATACGG ATGGCTATGC CGCTGTACAG ATAGGCTTTC AGTTAATTCG TGAAAAACTT 
ATCAACAAAC CTTCAAAAGG TCACCTTGCT AAATCAGGGA ATGACCTTTT GCGTCATCTT 
CGAGAGTACC GAGTAGAAAA TTCTAGTGAA TTTGAACTTG GAGCTTCAAT AACCGTTGAT 
GATTTCGAAA AAGGTCAAAA AGTTGATATT AGTGGTGACA CTATGGGTAG AGGATTCGCT 
GGTTATCAAA AGCGACATGG ATTTAGCCGA GGTCCCATGA GTCACGGTTC AAAGAATCAT 
CGATTACCTG GTTCAATAGG AGCTGGAACA ACTCCAGGTC GTGTTTATCC TGGAAAAAGG 
ATGGCTGGTC GAATGGGCGG TAAAAAAGTC ACTACCAGAG CACTTGAAAT TCTAAAGATA 
GATACAAATC ACAATTTATT GGTAGTAAAA GGATCCGTTC CAGGGAAGCC TGGATCTCTT 
TTAAATATAA GACCAGCCAA AAGAGTTGGC GCCCCTACCC AGCAAGGAGG TAAATGA
 
Protein sequence
MSLGILGKKL GMSQLFDDQG RAVPVTLIEA GPCRITQLKS ADTDGYAAVQ IGFQLIREKL 
INKPSKGHLA KSGNDLLRHL REYRVENSSE FELGASITVD DFEKGQKVDI SGDTMGRGFA 
GYQKRHGFSR GPMSHGSKNH RLPGSIGAGT TPGRVYPGKR MAGRMGGKKV TTRALEILKI 
DTNHNLLVVK GSVPGKPGSL LNIRPAKRVG APTQQGGK