Gene PMN2A_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1128 
SymbolrplD 
ID3606516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand- 
Start bp1615726 
End bp1616361 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content41% 
IMG OID637687999 
Product50S ribosomal protein L4 
Protein accessionYP_292321 
Protein GI72382966 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACT GTACTGTTCT TGATTGGCAA GGGAAAGAGG CTGGAGAATC ATCAATTGAT 
TTGAAGACTG CAAAGGAATC CTCAGCCGCA GATTTATTAC ATCGTGCTGT TTTGCGTCAA 
CAGGCTCACA GCCGTCAAGG TACTGCAAGC ACTTTGACTA GGTCTGAGGT TCGAGGAGGT 
GGGCGAAAAC CCTACAAGCA AAAGGGTACT GGTAGAGCAA GACAAGGCTC AATTAGAACT 
CCTCTTCGAC CAGGAGGTGG GATTATATTT GGCCCTAAGC CTCGCAAATA TAACTTGGAA 
ATGAATAGGA AGGAGCGAAG GCTAGCTCTT CGGACTGCTC TAATGAGTAG AATTCCAGAC 
GCAAAAATAA TCAAAGACTT CGGTTCAAAG CTTGAAGTTC CAAAAACAAG TGAAATTGTT 
GCTCTACTCA AGCGAGTAGG AATTGATTCT GATGTGAAAA TTCTCATTAT TCTCAATAAA 
CCATCAGAAA TTATAAAGCG TTCAATTAAA AACTTAGAGA AAGTAAAGCT TATCTCTGCC 
GATCAATTAA ATGTGTTTGA TCTTCTCAAT GCCAATTCTT TGGTAATAGG CGAAGACGCA 
TTATCAACCA TTAAGGAGGT CTATGGTAAT GACTAA
 
Protein sequence
MTNCTVLDWQ GKEAGESSID LKTAKESSAA DLLHRAVLRQ QAHSRQGTAS TLTRSEVRGG 
GRKPYKQKGT GRARQGSIRT PLRPGGGIIF GPKPRKYNLE MNRKERRLAL RTALMSRIPD 
AKIIKDFGSK LEVPKTSEIV ALLKRVGIDS DVKILIILNK PSEIIKRSIK NLEKVKLISA 
DQLNVFDLLN ANSLVIGEDA LSTIKEVYGN D