| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1073 |
|---|
| Symbol | rpsJ |
|---|
| ID | 3606460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 1563804 |
|---|
| End bp | 1564124 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637687943 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_292266 |
|---|
| Protein GI | 72382911 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACTG CAATTGCACA GCAAAAAATA CGCATTCGCC TAAAGGCTTT TGATAGAAGA
ATGCTTGATT TATCTTGCGA TAAAATAATT GAGACTGCAG ATACAACAGC TGCTTCAGCG
ATAGGTCCCA TTCCTCTTCC TACAAAAAGA AAAATTTATT GTGTTCTTCG TTCACCTCAT
GTTGATAAAG ATTCAAGAGA GCATTTTGAG ACAAGAACAC ATAGAAGAAT TATCGATATT
TACAGTCCTT CCGCAAAGAC AATAGACGCT TTAATGAAGT TGGATCTTCC TAGTGGAGTT
GATATAGAAG TTAAGCTCTA G
|
|---|
| Protein sequence | MSTAIAQQKI RIRLKAFDRR MLDLSCDKII ETADTTAASA IGPIPLPTKR KIYCVLRSPH
VDKDSREHFE TRTHRRIIDI YSPSAKTIDA LMKLDLPSGV DIEVKL
|
|---|
| |