| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_1067 |
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| Symbol | |
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| ID | 3606454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 1558218 |
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| End bp | 1560140 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637687937 |
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| Product | RNAse E |
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| Protein accession | YP_292260 |
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| Protein GI | 72382905 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.232877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGC AAATTGTCAT TGCTGAGCAT TTGCGAATTG CCGCTCTGCT CACTGATGAG
AGAATAGATG AATTAATCGT CGCTCAAGGT AGCTACCAAA TCGGAGATAT TTTCTTAGGA
ACCGTTGAAA ATGTTCTTCC TGGGATAGAC GCTGCTTTTG TCAATATTGG TGAAAGTGAA
AAAAATGGCT TTATTCATGT AAATGATTTA GGTCCACTGA GATTAAAAAA AGCAACTGCA
GGAATAACAG AGTTGCTCGA ACCAAGGCAA AAGGTTTTGG TTCAGGTGAT GAAAGAGCCC
ACTGGGACAA AAGGGCCTAG ATTAACTGGA AACATAGCTC TTCCTGGTAG ATATCTAGTA
CTCCAACCTT ATGGACAAGG GGTAAATATT TCGAGAAGAA TAAGCACTGA AAGTGAAAGA
AATCGACTTA GAGCATTAGG AGTATTAGTT AAGCCTCCAA GTACTGGACT TTTAATAAGA
ACAGAAGCGG AAGATATTTC TGAAGAATTT TTAATTGATG ATCTTGAAAA TCTTCTTAAA
CAATGGGAGC TTATTCAACA AGCATCAGAG AGTTGCACTC CGCCAATTCT CTTAAATAGA
GATGAAGACT TTATTCATAG AATTCTTCGA GATCATACAG GTCAAAATCT TACTCAGATT
GTTGTAGATA ATTCTGAAGC AATTGGTCGA GTTAAAAACT TCCTTGGCAA GGATAGTAAT
GAATTAACAA TAGAATTACA TAACGATTCG GAAAATATTT TGGAGAAATA CAAAGTCATA
TCTTCAATTA ATGAAGCATT AAAACCCAGA GTTGATCTTC CTTCGGGTGG GTATATAATA
ATAGAGCCAA CAGAAGCATT GACAGTTATT GATGTCAACT CAGGCTCATT TACACGATCT
GCGAATTCCA GAGAAACAGT ATTATGGACT AATTGTGAAG CCGCTATTGA GATAGGAAGA
CAATTAAAAT TAAGGAATAT TGGTGGGGTT ATTATTATTG ATTTTATTGA TATGGATACC
AAAAGAGATC AACTTCAATT ATTAGAACAT TTCACATCTG CTATTAATGG AGACTCGGCA
CGGCCACAAA TAGCTTCACT TACAGAACTA GGACTTGTTG AGCTCACTAG AAAAAGACAA
GGTCAAAATA TATATGAATT ATTTGGAAAG ACATCTCCTA ATTCTCAAGG GCAAGGTTAT
CTTCCAAGCA TTACTATTCA AGACATAAAT CCAACAACCC CATCTGAAGC TGGCGTAATC
AATGCAACTT TAATATCAGG CGAAGATATT CAATCTTTAC AAGAAAGTAA TAACAAGAAA
AAGCGTATAA ATAAAGCAAG AGATATAGAA GCAAACTTAA GCAATGAAGA ACACAAATCA
TCTACAGACA ACTCAAAAGC TATCTCCACG GATACAATTA CAGAAGATAT TCAAAAAGAG
AGTAATAATA AAAGAAAAGA AACAACGATA ATAAATATCA ATATGAATCA GAATGAAGAG
ATTGTATATA GTTTAATGGG ATTAGATCCT ATTTTACTTT TAGAGAAACC TCCACTATCT
GAAAACTATA AGGTTAATAT AATCAGACCT GGGAAAGAGG AAACTAGAGA AGAAAAGAGT
AACATGCCTG AGGGTAATCA ACAAAAAATA GTTGATGATT CTATTAGCAA ACATCAAAAT
AATAATAAGG ATATTATTCG TCTTAAAGAC AAAAGTAATA TTGAACAAAA ATCAACCAAT
TCTGACGAAA AAGAGAGTGA TGAAGAAGAA AAAATCAATG TAGATTTGGA TCAAGAAACA
AATGAATTAA TAAATATTAA TCATAATTCA ATAAGCGAAA AGAATGAATT ACCTTCCACC
GAGTCACAAG AAGTTAATGA GGATCCAAGA CGAAAAAGAA GAAGGTCTTC AGCCTCTTCT
TAA
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| Protein sequence | MPQQIVIAEH LRIAALLTDE RIDELIVAQG SYQIGDIFLG TVENVLPGID AAFVNIGESE
KNGFIHVNDL GPLRLKKATA GITELLEPRQ KVLVQVMKEP TGTKGPRLTG NIALPGRYLV
LQPYGQGVNI SRRISTESER NRLRALGVLV KPPSTGLLIR TEAEDISEEF LIDDLENLLK
QWELIQQASE SCTPPILLNR DEDFIHRILR DHTGQNLTQI VVDNSEAIGR VKNFLGKDSN
ELTIELHNDS ENILEKYKVI SSINEALKPR VDLPSGGYII IEPTEALTVI DVNSGSFTRS
ANSRETVLWT NCEAAIEIGR QLKLRNIGGV IIIDFIDMDT KRDQLQLLEH FTSAINGDSA
RPQIASLTEL GLVELTRKRQ GQNIYELFGK TSPNSQGQGY LPSITIQDIN PTTPSEAGVI
NATLISGEDI QSLQESNNKK KRINKARDIE ANLSNEEHKS STDNSKAIST DTITEDIQKE
SNNKRKETTI ININMNQNEE IVYSLMGLDP ILLLEKPPLS ENYKVNIIRP GKEETREEKS
NMPEGNQQKI VDDSISKHQN NNKDIIRLKD KSNIEQKSTN SDEKESDEEE KINVDLDQET
NELININHNS ISEKNELPST ESQEVNEDPR RKRRRSSASS
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