Gene PMN2A_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_1001 
Symbol 
ID3606387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1493123 
End bp1493878 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content34% 
IMG OID637687870 
ProductSAM dependent methyltransferase 
Protein accessionYP_292194 
Protein GI72382839 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA TATGGTCTAG CCAAGTTAAT AAGAACTTTA ATGAAGCTGC ATTAAGTTAT 
GACGAATCAG CATCAATTCA AAAAAGTACT GCTTTAAAAC TTGCAAAAAT ATGTTCTCAT
CATTCAATTA AACATGGACT ATGGGTTGAC CTTGGTTCTG GCACTGGACT ACTCGCCAAA
TCATTAGAAG ATATACATCC AAACCAATAT GTAGTGAGAT TGGATAATTC TAAAAAGATG
ATTGATCAAC ATTCAGAAAA GAGTGTTAAA CAACTTTGGG ATTTAAATAA TGGGCTACCT
AAGTGGTCTA AAAAACCAAA TTTATTAGCT TCAAGTTTTG TTTTACATTG GCTAGATAAT
CCACAAAAGA AACTTGAGGA ATGGTTCAAT TCTCTAAGCT TAGATGGATG GATTGCTTTA
GCAATCCCAA TCCAAGGAAG TTTCCCAGAA TGGTATGAAG CTGCCGAAAA GGCAAATTTA
ATATGTACGG CTCTTGATTT ACCATCATAC GACTCACTGA TTAGAGTCGT TCCAAAACAA
AGTATTTTAT ATGATAAAAT TGAAGTTATC AAACAAACTG CTAAGAAGGC GACCTCTTTA
TTAAAACCGA TGGTCAAGGT CGGGGCACAA AGTAGTCAGA AGGAACAATT AAGTGTTTCA
GATTGGAGAC ATCTATTATC TTTTTGGCCA ATTTCCAACA AAGATCAACA AGTAAGCCTT
AGTTGGTCAA TTCAGTTTTT ATTAATAAAG CGATGA
 
Protein sequence
MQKIWSSQVN KNFNEAALSY DESASIQKST ALKLAKICSH HSIKHGLWVD LGSGTGLLAK 
SLEDIHPNQY VVRLDNSKKM IDQHSEKSVK QLWDLNNGLP KWSKKPNLLA SSFVLHWLDN
PQKKLEEWFN SLSLDGWIAL AIPIQGSFPE WYEAAEKANL ICTALDLPSY DSLIRVVPKQ
SILYDKIEVI KQTAKKATSL LKPMVKVGAQ SSQKEQLSVS DWRHLLSFWP ISNKDQQVSL
SWSIQFLLIK R