Gene PMN2A_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0994 
Symbol 
ID3606380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1484335 
End bp1485129 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content38% 
IMG OID637687863 
Producthemolysin A 
Protein accessionYP_292187 
Protein GI72382832 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.199053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA AATCGCGATT AGATCTTCAC TTGCTGACTA AAGGGTTGGT GAAAACACGT 
CAAGAGGCTC AGAACCTTAT CAGAGCTGGC AAAGTTAAAA CAATTAACGG TCAAATTCTT
GATAAGCCAG GCCAAGAAGT TTTAAGAGAT CTTGAGATAG AAGTTACGCA GCCCTTGAGA
TATGTATCTA GAGGGGGTGA AAAGTTGGCT GAAGCGTTTA ATCAATTTCC TCTAGATATT
AAGAATAGGA TTTGTTTAGA TGCTGGGATT TCAACTGGTG GTTTTACAGA TTGTCTTTTA
CAGCAAGGAG CGGCAAAGGT TTATGGAGTT GATGTTGGCT ATGGTCAGAC TGCATGGAGT
ATTAGAAATG ATCCAAGAGT GGTTCTTTTG GAACGAACCA ATATTAGGCA TTTAACTCCT
GAAAAATTAT TCAATGATGG AGACCCAATA CCAGATTTCG CAGTAGCTGA TTTATCTTTT
ATCTCTCTTA AAATTGTTTT ACCGAGTATC AAATCTCTTC TTCAATCTGA CCGGTCTGAG
TTGTTGGTAT TAGTGAAACC TCAATTTGAG GTTGGCAAAG ATAAAGTTGG CAAAGGTGGA
GTGGTTCGTG ATCATTCGCT ACATGCTGAG GCTGTAGAGG GTGTGGTTAA CGAATCTAAA
AAATATGGAT GGAATCCGAA AGGGTTAATT GCATCGCCTT TAAAAGGTCC TGCTGGTAAT
CAAGAATATC TTCTTTGGAT GGGTGATGAG GTAAAAGGCA ATATTGAACT CGAAAAATTA
TTTAATGTTT TTTGA
 
Protein sequence
MTKKSRLDLH LLTKGLVKTR QEAQNLIRAG KVKTINGQIL DKPGQEVLRD LEIEVTQPLR 
YVSRGGEKLA EAFNQFPLDI KNRICLDAGI STGGFTDCLL QQGAAKVYGV DVGYGQTAWS
IRNDPRVVLL ERTNIRHLTP EKLFNDGDPI PDFAVADLSF ISLKIVLPSI KSLLQSDRSE
LLVLVKPQFE VGKDKVGKGG VVRDHSLHAE AVEGVVNESK KYGWNPKGLI ASPLKGPAGN
QEYLLWMGDE VKGNIELEKL FNVF