Gene PMN2A_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0989 
Symbol 
ID3606375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1481116 
End bp1481856 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content37% 
IMG OID637687858 
Productputative c-type cytochrome biogenesis protein CcdA 
Protein accessionYP_292182 
Protein GI72382827 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.23416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAAAGTC TCTTTTTGAA CATTTCTCAT ATAAATTTAA TTTTCTCTGA TTTGACTCGT 
CATGGCGAGC AGTTAATTAA TAATGGGCTC AATAATCCAA CTCCCCTAAC AATTCTGATA
GTTTTCACTG GAGGACTCTT GACTAGCTTG GGGCCCTGTT CATTATCACT TTTACCAATC
ACAGTTGCTT ATTTAGCTGG ATTTAAAAAT AACCAAAACC CTTTACAAAA AACGATTAGT
TTCTGCAGCG GTATAGTTTT TTCACTAGTT GTATTAGGAA GTCTAAGCGG GTTCTTAGGA
AAAATTTATG GTCAATTACC AGGTTTCTTT TCAATATTCA TTAGTTTTTT AGCAATAATT
ATGGGTCTTA ATCTGCTTGG GATTTTGAAA TTCTCACTTC CATCTGGTCC TGACCCTGAA
ATTTGGAAAA ATAAAGTTCC TTCTGCATTC GCTCCAGTTT CAGCAGGTTT TGCTTTTGGA
TTAGCATCAT CGCCCTGCAC TACTCCTGTT CTTGCAGTTC TTCTCGCTTG GGTTGCCAAA
CAAGGAAATC CTCTAAGCGG CACGATTTTT CTTGGAAGTT TTGCGATTGG ACAAATTGTT
CCTTTATTTG TAGCAGGTAC ATTTGCAGCA AGTATTCCAA AATTATTATC GTTGCGACCT
ATTGGGAAAT GGGTTCCACC AATTAGCGGA GTCATTTTGT TAACCATTGG TCTAATAAGC
CTACTTTCTA TTTGGATATA A
 
Protein sequence
MESLFLNISH INLIFSDLTR HGEQLINNGL NNPTPLTILI VFTGGLLTSL GPCSLSLLPI 
TVAYLAGFKN NQNPLQKTIS FCSGIVFSLV VLGSLSGFLG KIYGQLPGFF SIFISFLAII
MGLNLLGILK FSLPSGPDPE IWKNKVPSAF APVSAGFAFG LASSPCTTPV LAVLLAWVAK
QGNPLSGTIF LGSFAIGQIV PLFVAGTFAA SIPKLLSLRP IGKWVPPISG VILLTIGLIS
LLSIWI