Gene PMN2A_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0912 
Symbol 
ID3606297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1415193 
End bp1417262 
Gene Length2070 bp 
Protein Length689 aa 
Translation table11 
GC content36% 
IMG OID637687781 
Producttwo-component sensor histidine kinase 
Protein accessionYP_292106 
Protein GI72382751 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA CAAATTCAAA TCAGAATAAA AACTTTATAG CATCAAAACA TGATGTAATA 
TTAGATGATT TAACCTTATT AGAAAAAATA AATTTATGGT GGTCTAGATT TAATTTAAGA
TCTAAACTAC TAGCATTTGG AACGCTAGTA GTTAGTTTCA TAATGACACT TATTACGTTT
TTTGCTTTAA GTAGTATTCA AAAGGATGCT GGCATGAATG ATACAAGATA CGCCAGAGAT
TTAGGGTTGT TATTGTCAGG GAACGTTACG GAATTAGTAG CGAAGAATCA AACAAGAGAA
CTTTTCAACG TTGCTGAGAA GTTTTGGCGT TCTAGTAGGA ACTTGAGATA CATTTTCTTC
ACTGACCCAG ATGGGTTTGT AAAATTGGGT ATACCAGTTA GTGCAACGGC TTCAGACTCT
GATGCTGAAG GTGCTTTGCA ACTAACCAGA AAACTTAAAT TACCAAGTGA ATTAAAAAAA
CAACCTCAAT TTCCATTAGT CAGACAACAT TCAACTCCAC AAGGCCAGGT AACTGATGTT
TTTGTTCCCA TGCTTTGGAA AGGTGAATAT CTAGGCACCT TGGCTCTGGG GGTAACACCG
AACAAAAAAG CTCTTGCTAC AGCCGCTTTA ACCAGAGAAA TTACTGTTGC AGTATTTATT
TCTATTTGGG TTTTAGTAAT AATAGGAGCT GTATTTAATG CGCTAACAAT CACTCGTCCA
ATAAGAGAAT TAGTTATTGG AGTCAGAGAA ATTGCTAAAG GTAATTTCAA ATCAAGAGTA
GATCTACCTA TGAGTGGAGA ACTTGGGGAA CTCTTAACTG GGTTTAATGC AATGGCATCA
AGATTAGAAG ATTATGATGC TGCAAATATA GAGGAACTTA AAGCTGCCCA AGTCAAACAG
CAATCCTTAA TAGCCACAAT GGCAGATGGA GCCCTTCTTC TTGACGAGCA AGGAAATATT
GTCTTAGTCA ATCCAACTGC TAGAAGACTA TTCCGCTGGG AAGGGAGAAA TCTTGAAGGT
CAAAATTTAT TGAATCAACT TCCTGACTCT CTTGTAAAAG AACTTGAAAC ACCAATAACC
TCTCTATTGA ACAATTTCGG AGACAGCGAT GATTTGCGTT GCAATCTTGA AGAACCACCA
AGAACACTTC GTATAGTTTT AAAGTCTGTC AGAGACACGA CTGGAGAGAA TATAAAAGGT
ATTGCTGTTA CGATTCAAGA TCTCACTAGG GAAGTCCAAT TAAACGCAGC ACAAAAAAGA
TTCATCAGCA ATGTTTCTCA CGAACTGAGA ACGCCATTAT TCAACATTAA AAGCTATGTT
GAAACTCTAT ATGACCTAGG AGAGCAGCTT ACAAAAGACG AGCAAAAAGA ATTTCTAGGT
GTTGCGAATT CAGAAACAGA TAGACTCACT CGCTTGGTCA ATGATGTTCT TGACTTATCC
AAGTTGGAGT CTGGAAGAAC AATCCAATTA GAAGCACTAA GTATAAAAGA AGCTATGGAA
CAAACGCTAA GAAACTATAA ACTTAATGCC GAGGAAAAAA ATGTGAAATT AATATTAAAT
GTTGAAAATA ATTTGACATT TGTTTTAGGT AACTGGGATA TGCTTCTTCA GGTTTTTGAC
AATCTTGTTG GTAATGCACT TAAATTCAGT CAAGAGGGAG GAACAATAAA TTTAAAGGCT
TATACATGGC CCGATATATG CGTTGCTTCG CCAGTGGATT TAGATAATAA AGCTCCACAT
TGTGAAATTT TGTCCCCGAT GCCAAAAATC AGAGTTGAGG TCTCCGATAC AGGATATGGA
ATTTCTGAAA TTGATCAACA AAGAATATTT GAACGTTTTT ACAGAGTTGA AGATTCAGTA
CATACTGAAG TGGGCACTGG ACTTGGCCTT TCAATCGTTA AAGGGATCGT TGATAAGCAC
GGAAGTGAGA TCAGAATGGC AAGTGAACCA AATACTGGAA CAACTTTTTG GTTTGAACTT
CCTCTTGAAG ACTCTGACGC TGATGAGTTG TTACTAAAAT CTGCTAGAAA AAATTGGGAA
CTTGAAAATG ATAAGACATT AATTAAATAG
 
Protein sequence
MKNTNSNQNK NFIASKHDVI LDDLTLLEKI NLWWSRFNLR SKLLAFGTLV VSFIMTLITF 
FALSSIQKDA GMNDTRYARD LGLLLSGNVT ELVAKNQTRE LFNVAEKFWR SSRNLRYIFF
TDPDGFVKLG IPVSATASDS DAEGALQLTR KLKLPSELKK QPQFPLVRQH STPQGQVTDV
FVPMLWKGEY LGTLALGVTP NKKALATAAL TREITVAVFI SIWVLVIIGA VFNALTITRP
IRELVIGVRE IAKGNFKSRV DLPMSGELGE LLTGFNAMAS RLEDYDAANI EELKAAQVKQ
QSLIATMADG ALLLDEQGNI VLVNPTARRL FRWEGRNLEG QNLLNQLPDS LVKELETPIT
SLLNNFGDSD DLRCNLEEPP RTLRIVLKSV RDTTGENIKG IAVTIQDLTR EVQLNAAQKR
FISNVSHELR TPLFNIKSYV ETLYDLGEQL TKDEQKEFLG VANSETDRLT RLVNDVLDLS
KLESGRTIQL EALSIKEAME QTLRNYKLNA EEKNVKLILN VENNLTFVLG NWDMLLQVFD
NLVGNALKFS QEGGTINLKA YTWPDICVAS PVDLDNKAPH CEILSPMPKI RVEVSDTGYG
ISEIDQQRIF ERFYRVEDSV HTEVGTGLGL SIVKGIVDKH GSEIRMASEP NTGTTFWFEL
PLEDSDADEL LLKSARKNWE LENDKTLIK