Gene PMN2A_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0872 
Symbolddl 
ID3606255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1378584 
End bp1379630 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content31% 
IMG OID637687740 
ProductD-alanyl-alanine synthetase A 
Protein accessionYP_292066 
Protein GI72382711 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.658926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTCAA ATAAACAAGT TATAGGAGTT GTTTTTGGAG GTAAATCTAG TGAGCATGAA 
GTCTCTATAA AATCCGCGAA AACTATTTAC AATGCTTTAA GATATTTAAG TAATAAGGAA
CGTTATATAG CAAGACCAAT TTATATTGAT AAGTACGGTT ATTGGCATGA CTATATATTT
TCAGAATCCA TTTTATTTGA TAAAAAAGAT CATTTAATCT TTGAAGAAAG AAGAATTAAT
CTTACTAATT TATCAAACAT GGAAGATATT GATGTCTGGT TCCCTTGCCT TCATGGACCA
AATGGAGAGG ATGGTGTAAT CCAAGGACTG TTTAAATCAA CTGGAAAACC ATTTGTAGGC
TCGGGTGTTC TCGGGTCCGC ATTAGGTATG GATAAAATAG CAATGAAATC AGTATTTAAA
TCATATAATT TACCTCAAGT TCCTTATATA AGCTTAAACA AACCTGATAT CCAAAATAAT
TTATATATGA AATCTATTTA TGAACAAATA AATAAAATAA TTAGTTATCC TTGTTTTATT
AAACCTGCAA ATCTAGGTTC TTCTGTCGGC ATAACAAAAG CATACTCAAA AGAAGAATTT
ATTGCTGGAA TAGAATTTGC TGCAAAATAT GATGAGAGAA TTATAGTGGA AAAAAGTATA
GAAGGAAGAG AACTTGAATG CGGTATTTTA GGAAAATCAA TCATGAAGTC ATCTGTTGTT
GGGGAAGTTA AATTTCAAAC TGATTGGTAT ACATATGAGT CTAAATATAA TGCGAATCTA
AGCAGTACAA TTATCCCAGC TGATTTGAAT ATAGAGATAT CCAATAAGAT ACAAAAACTA
GCTATCGAGG CCTGTAAAGC TATTAATGCT TATGGTTTAG CAAGAGTCGA TTTTTTTTAT
CAAGAGAGCA CGCAACAGAT TTATATAAAT GAAGTAAACA CCTTGCCAGG ATTCACTAAA
ACAAGCATGT ACCCGACATT GTGGGAAGCT TCTGGATTAA AACTAGAAAA ACTTGTTGCT
AATCTCATAG AAATAGCTAA AGAATGA
 
Protein sequence
MFSNKQVIGV VFGGKSSEHE VSIKSAKTIY NALRYLSNKE RYIARPIYID KYGYWHDYIF 
SESILFDKKD HLIFEERRIN LTNLSNMEDI DVWFPCLHGP NGEDGVIQGL FKSTGKPFVG
SGVLGSALGM DKIAMKSVFK SYNLPQVPYI SLNKPDIQNN LYMKSIYEQI NKIISYPCFI
KPANLGSSVG ITKAYSKEEF IAGIEFAAKY DERIIVEKSI EGRELECGIL GKSIMKSSVV
GEVKFQTDWY TYESKYNANL SSTIIPADLN IEISNKIQKL AIEACKAINA YGLARVDFFY
QESTQQIYIN EVNTLPGFTK TSMYPTLWEA SGLKLEKLVA NLIEIAKE