Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0872 |
Symbol | ddl |
ID | 3606255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1378584 |
End bp | 1379630 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637687740 |
Product | D-alanyl-alanine synthetase A |
Protein accession | YP_292066 |
Protein GI | 72382711 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.658926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCAA ATAAACAAGT TATAGGAGTT GTTTTTGGAG GTAAATCTAG TGAGCATGAA GTCTCTATAA AATCCGCGAA AACTATTTAC AATGCTTTAA GATATTTAAG TAATAAGGAA CGTTATATAG CAAGACCAAT TTATATTGAT AAGTACGGTT ATTGGCATGA CTATATATTT TCAGAATCCA TTTTATTTGA TAAAAAAGAT CATTTAATCT TTGAAGAAAG AAGAATTAAT CTTACTAATT TATCAAACAT GGAAGATATT GATGTCTGGT TCCCTTGCCT TCATGGACCA AATGGAGAGG ATGGTGTAAT CCAAGGACTG TTTAAATCAA CTGGAAAACC ATTTGTAGGC TCGGGTGTTC TCGGGTCCGC ATTAGGTATG GATAAAATAG CAATGAAATC AGTATTTAAA TCATATAATT TACCTCAAGT TCCTTATATA AGCTTAAACA AACCTGATAT CCAAAATAAT TTATATATGA AATCTATTTA TGAACAAATA AATAAAATAA TTAGTTATCC TTGTTTTATT AAACCTGCAA ATCTAGGTTC TTCTGTCGGC ATAACAAAAG CATACTCAAA AGAAGAATTT ATTGCTGGAA TAGAATTTGC TGCAAAATAT GATGAGAGAA TTATAGTGGA AAAAAGTATA GAAGGAAGAG AACTTGAATG CGGTATTTTA GGAAAATCAA TCATGAAGTC ATCTGTTGTT GGGGAAGTTA AATTTCAAAC TGATTGGTAT ACATATGAGT CTAAATATAA TGCGAATCTA AGCAGTACAA TTATCCCAGC TGATTTGAAT ATAGAGATAT CCAATAAGAT ACAAAAACTA GCTATCGAGG CCTGTAAAGC TATTAATGCT TATGGTTTAG CAAGAGTCGA TTTTTTTTAT CAAGAGAGCA CGCAACAGAT TTATATAAAT GAAGTAAACA CCTTGCCAGG ATTCACTAAA ACAAGCATGT ACCCGACATT GTGGGAAGCT TCTGGATTAA AACTAGAAAA ACTTGTTGCT AATCTCATAG AAATAGCTAA AGAATGA
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Protein sequence | MFSNKQVIGV VFGGKSSEHE VSIKSAKTIY NALRYLSNKE RYIARPIYID KYGYWHDYIF SESILFDKKD HLIFEERRIN LTNLSNMEDI DVWFPCLHGP NGEDGVIQGL FKSTGKPFVG SGVLGSALGM DKIAMKSVFK SYNLPQVPYI SLNKPDIQNN LYMKSIYEQI NKIISYPCFI KPANLGSSVG ITKAYSKEEF IAGIEFAAKY DERIIVEKSI EGRELECGIL GKSIMKSSVV GEVKFQTDWY TYESKYNANL SSTIIPADLN IEISNKIQKL AIEACKAINA YGLARVDFFY QESTQQIYIN EVNTLPGFTK TSMYPTLWEA SGLKLEKLVA NLIEIAKE
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