Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0768 |
Symbol | |
ID | 3606146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 1276597 |
End bp | 1277979 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637687631 |
Product | photosystem II PsbC protein (CP43) |
Protein accession | YP_291962 |
Protein GI | 72382607 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAACGC CCTTTAATAG TTTACTCAAA GCTCCTAATC AAAGTCTTGA AGAGACTGGT TACGCCTGGT ATGTAGGAAA TGCAAGGCTA ATCAATCTTT CAGGAAGACT TTTAGGCGCT CACATTGCTC ACGCAGGACT AATTGTGTTC TGGGCAGGCG CGATGATGCT TTTCGAAGTA AGTCACTTCA CCATGGATAA ACCCATGTGG GAACAAGGCT TAATTTGTAT GCCTCACGTA GCCATGTTTG GATACGGCAT TGGTCCAGGT GGAGAAGTCA CGGATGTATG GCCTTTCTTC ATTGCTGGTG TTATTCACCT AGTTGCATCT GGAATCCTTG GCTTTGGTGG TGTTTTTCAC TCCCTTGCAG GCCCAGAGAA ACTTGAAGAA GATTTCCCAT TCTTCTCTAC TGACTGGAGA GATAAAAACC AAATGACCAA TATTCTTGGT TTTCATTTGG TTGTTCTTGG TGTTGGAGCT CTTCTATGGT CCATTAACTG GATGTACATA GGTGGTGCAT ACGACACTTG GGCTCCAGGT GGAGGAGAAG TTAGGTTGAT CAACCCAACA CTCGATCCAA GAATTATTTT TGGATATCTG CTATCAACCC CATGGGGTGG TGGTGGTTGG ATGGTTGGTG TTAACTCAAT GGAAGATATT GTCGGAGGAC ATGTTTACCT GGGAGTGATT GAAATAATTG GTGGTCTTTT CCATATCTTC ACTCAGCCTT ACGGGTGGGC AAGAAGAGCC TTTATCTGGA ACGGTGAAGG TCTTCTAAGT TATGCGTTAG GTGGAATCTG TGTCGCAAGT TTTGTTGCCT CATGTTTCAT CTGGTTTAAC AACACTGCCT ATCCATCTGA GTTCTACGGT CCAACAAACG CTGAAGCTTC TCAGGCCCAA AGTTTTACAT TCCTAGTTCG TGACCAACGA ATTGGAGCAA ATGTAGGTTC AACAATGGGT CCGACTGGTT TAGGTAAATA CCTAATGCGT TCTCCTACAG GTGAAATCAT CTTTGGTGGA GAGACTATGC GTTTTTGGGA TTTCCGAGGA CCTTGGCTTG AGCCTCTTAG AGGACCAAAT GGTCTCAGCC TTGAGAAGAT TCAAAATGAT ATTCAGCCTT GGCAAGTTCG CCGCGCTGCT GAATACATGA CACATGCTCC AAACGCTTCT ATCAACTCAG TTGGTGGAAT CATTACTGAG CCCAATGCTG TTAACTTTGT TAACTTGCGT CAATGGCTAG CAGGTGCTCA ATTCTTCCTT GGTTGGTTTA CTTTTGTAGG TCATCTTTGG CATGCCGGTC GTGCGAGAGC CGCTGCGGCT GGATTTGAAA AAGGTATCAG TCGTTCACAA GAGCCTGCTC TTTCAATGCC TGATCTAGAT TAG
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Protein sequence | METPFNSLLK APNQSLEETG YAWYVGNARL INLSGRLLGA HIAHAGLIVF WAGAMMLFEV SHFTMDKPMW EQGLICMPHV AMFGYGIGPG GEVTDVWPFF IAGVIHLVAS GILGFGGVFH SLAGPEKLEE DFPFFSTDWR DKNQMTNILG FHLVVLGVGA LLWSINWMYI GGAYDTWAPG GGEVRLINPT LDPRIIFGYL LSTPWGGGGW MVGVNSMEDI VGGHVYLGVI EIIGGLFHIF TQPYGWARRA FIWNGEGLLS YALGGICVAS FVASCFIWFN NTAYPSEFYG PTNAEASQAQ SFTFLVRDQR IGANVGSTMG PTGLGKYLMR SPTGEIIFGG ETMRFWDFRG PWLEPLRGPN GLSLEKIQND IQPWQVRRAA EYMTHAPNAS INSVGGIITE PNAVNFVNLR QWLAGAQFFL GWFTFVGHLW HAGRARAAAA GFEKGISRSQ EPALSMPDLD
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