Gene PMN2A_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0723 
Symbol 
ID3606101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp1216273 
End bp1217337 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content43% 
IMG OID637687586 
Productchlorophyll a/b binding light harvesting protein PcbB 
Protein accessionYP_291917 
Protein GI72382562 
COG category 
COG ID 
TIGRFAM ID[TIGR03041] chlorophyll a/b binding light-harvesting protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.543048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCT ATGGAAATCC AGATGTCACC TACGGGTGGT GGGCTGGTAA TTCAAGGGTT 
ACCAACCGCG CTGGAAAGTT CATTGCAGCC CATGCTGGTC ATACTGGCCT AATTTCATTT
GCTGCAGGAG CTAGCACTCT TTGGGAGCTA GCTAGGTTTG ATCCTTCTAT AGCCATGGGG
CACCAAAGCT CTATCTTTCT CGCTCATCTT GCATCTATTG GAATTGGATT TGATGATGCA
GGTGTTTGGA CTGGAGCGAA TGTTGCTTCA GTAGCAATTG TCCATATTAT TGCTTCTCTT
GTTTATGCAG GAGGAGCTCT TTCTCACTCT CTGCTCTTTG ATGGGGATTT GGCTGATGGG
CCAGGACCTA CTACTCAAAA ATTCAAGCTT GAATGGGACA ATCCCGATAA TTTGACATTT
ATTTTGGGTC ACCATCTTAT TTTCTTTGGG GTGGCTTGTA TTGCTTTTGT TGAATGGGCC
AGAATTCACG GGATTTATGA CCCAGCAATA GGAGCTGTTC GACAAGTTGA GTACAACCTT
AATTTGACCA ATATTTGGAA CCATCAGTTT GATTTCTTAG CTATAGATAA TCTTGAAGAT
GTTTTGGGCG GCCATGCGTT TTTAGCATTT GTTGAGATAA CTGGTGGTGC TTTCCATATC
GCAACTAAGC AGGTAGGAGA ATACACAGAA TTCAAAGGAG CTGGGATCCT TTCTGCCGAA
GCTGTTTTAT CTTTCTCATT GGCAGGTATT GGTTGGATGG CGATTGTCGC AGCATTCTGG
TGCGCAACAA ATACAACTGT TTATCCTGAA CCTTGGTTTG GAGAGCCTTT AGCTTTGAAA
TTTGGAATTT CTCCCTATTG GATCGATACT GTAGAGGTAA GTGAGAGCAC TGCACTAGCA
GGTCACACCA CAAGAGCTGC TTTAACAAAT GTCCATTATT ATTTTGGATT CTTCTTCTTA
CAAGGTCATT TATGGCACGC TATTCGTGCA TTAGGCTTTG ACTTTAGGAG AGTTACAAAT
GCTGTAGCTG GTTTAGATAG GGCACAAATC ACTCTTAATG ACTAA
 
Protein sequence
MQTYGNPDVT YGWWAGNSRV TNRAGKFIAA HAGHTGLISF AAGASTLWEL ARFDPSIAMG 
HQSSIFLAHL ASIGIGFDDA GVWTGANVAS VAIVHIIASL VYAGGALSHS LLFDGDLADG
PGPTTQKFKL EWDNPDNLTF ILGHHLIFFG VACIAFVEWA RIHGIYDPAI GAVRQVEYNL
NLTNIWNHQF DFLAIDNLED VLGGHAFLAF VEITGGAFHI ATKQVGEYTE FKGAGILSAE
AVLSFSLAGI GWMAIVAAFW CATNTTVYPE PWFGEPLALK FGISPYWIDT VEVSESTALA
GHTTRAALTN VHYYFGFFFL QGHLWHAIRA LGFDFRRVTN AVAGLDRAQI TLND