| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0601 |
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| Symbol | |
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| ID | 3605976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL2A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007335 |
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| Strand | + |
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| Start bp | 1094286 |
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| End bp | 1095008 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637687461 |
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| Product | ribosomal large subunit pseudouridine synthase F |
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| Protein accession | YP_291795 |
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| Protein GI | 72382440 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.624758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACCA GAATTAATAA ATATTTAAGT GAAGTCGGTT ACTGTTCTAG AAGAGTCGCA
GATAGACTAA TTGAAGAAGG AAAAGTAGTC ATTAATGGTA AAATTCCAGA AAAGGGTACG
AAGGTAGAGG AAGGTGATCA AGTAAAAGTT GACGGTCAAA GAATAGAAAA ATCAACGAAA
CAAAAAAATA TATACTTAGC CTTTAATAAA CCTGTTGGGA TTGTTTGCAC AACCGATAGA
AGAGTAGAAC ACGACAACAT TATAGATTTC ATTAAATATC CTACAAGAAT TTTTCCTATT
GGAAGATTGG ATAAGCCCAG TGAGGGACTA ATTTTTTTAA CTAACGATGG AGATATCGTA
AATAAGATAC TCAGAGCAAG AAATAATCAT GAAAAAGAAT ACATCGTAAG CGTTAATCGT
CCGATTAATA GAGACTTTAT TCAAAGTATG AGTAATGGAG TTGAAATACT AGAAACTATA
ACTAAGAATT GTTTCGTAAA ACAATTGGGG GCGAAAAAAT TTAAAATCAT ACTCACTCAA
GGACTTAACC GTCAGATCAG GAGAATGTGT GAGTCCTTAG GCTACAGAGT AGAATCATTA
AAGAGGGTAA GAATTATGAA TATTAAGTTA GACGTACCAA TTGGAAAATA TCGCGAATTT
ACCAAAGAAG AACTTTTAGA ATTAAATGGA TTACTCGAAA ACTCTTCAAA AACATTTGAC
TAA
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| Protein sequence | MATRINKYLS EVGYCSRRVA DRLIEEGKVV INGKIPEKGT KVEEGDQVKV DGQRIEKSTK
QKNIYLAFNK PVGIVCTTDR RVEHDNIIDF IKYPTRIFPI GRLDKPSEGL IFLTNDGDIV
NKILRARNNH EKEYIVSVNR PINRDFIQSM SNGVEILETI TKNCFVKQLG AKKFKIILTQ
GLNRQIRRMC ESLGYRVESL KRVRIMNIKL DVPIGKYREF TKEELLELNG LLENSSKTFD
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