Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0293 |
Symbol | |
ID | 3605665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | - |
Start bp | 831107 |
End bp | 833029 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637687151 |
Product | FtsH peptidase |
Protein accession | YP_291488 |
Protein GI | 72382133 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAGA AATGGAAAGT TGTAGCACTT TGGGTGCTAC CCATAACGAT AGTAATACTA ATTACGTGGC AAATTCTTGG CTCTTCAACA AATACCCAAG TTAATCAAAC AAATACATCT AATCCATCAA GAAATGCTCC GGTTGCAAAG ATCAGTTATG GAAGATTTCT TGATTATGTA AAAGCTGGAA GAGTAACTTC TGTTGACATT TACGAAGGTG GTAGAAATGC AATCGTCGAG TCCGTTGATC CCGAAATTGA TAACAGAATT CAACGTTTAA GAGTTGATCT ACCAGGTTTG GCTCCTGAAT TAGTCTCCTC CCTAAAAGAT GAGGGAATCA GTTTTGACAT TCATCCACCT AAAACGGCAC CAGCGGGAGT TGGAATTCTT GGCAACCTTC TCTTTCCAAT TATTCTAATA GGAGGTCTGA TTTTACTTTC AAGAAGATCA AACTCTATGC CAGGCGGTCC AGGGCAAGCT ATGCAATTTG GTAAAACAAA AGCAAGATTT GCAATGGAAG CTGAGACTGG TGTCAAATTC GATGATGTAG CAGGAGTAAA TGAAGCGAAA CAGGATTTAG AAGAGGTTGT CACATTTTTA AAACAACCTG AAAGATTTAC ATCTGTAGGG GCTCAAATAC CAAGAGGTGT TTTACTAGTT GGTCCTCCAG GAACAGGTAA AACCCTATTA GCAAAGGCTA TTGCTGGAGA AGCTGGAGTT CCTTTCTTCT CTCTTTCAGG TTCAGAATTT GTAGAAATGT TTGTAGGTGT AGGTGCAAGT CGTGTCAGAG ATTTATTTAA AAGAGCCAAA GAAAACAGTC CTTGCTTGAT TTTTATTGAT GAAATTGATG CAGTCGGAAG ACAGAGGGGT GCTGGAATTG GAGGAGGTAA TGACGAAAGA GAGCAAACAC TCAATCAACT TCTGACTGAG ATGGATGGAT TTGAAGGTAA TAGTGGAATC ATCATCATTG CAGCTACAAA TAGACCTGAC GTTCTTGACT CAGCATTGAT GAGGCCAGGT AGATTCGATA GACAAGTAAC CGTTGACGCG CCAGACATAT CAGGGAGATT GTCAATTCTC AAAGTTCACT CAAGAAATAA AAAATTAGAA AAGGATTTAA CTTTAGAAAG TATTGCTAGA AGAACCCCTG GTTTTACAGG TGCTGATTTA GCCAATTTGC TAAATGAAGC AGCTATTCTT ACAGCCAGAA GAAGAAAGAA TCAAATAGGT CTTTCTGAAA TTGATGATGC TGTTGATCGC ATCATTGCAG GAATGGAAGG GACACCACTA GTAGATGGAA GAAGCAAGAG ACTCATCGCC TATCACGAGG TTGGTCATGC CTTGATAGGG TCATTGGTAA AAGATCATGA TCCTGTTCAA AAAGTAACTG TTATCCCAAG AGGACAAGCA CAGGGTTTGA CATGGTTCTC TCCAGATGAT GATCAGTCTT TGATTAGCAG GGCACAATTA AAAGCAAGAA TTATGGGGGC TCTTGGAGGG AGAGCTGCAG AGGATATTAT TTTCGGAAGA GAAGAAGTAA CAACTGGGGC TGGAGGTGAT GTACAAATGG TTGCATCAAT GGCAAGGCAA ATGGTTACGA GGTTTGGCAT GAGCAGCCTC GGTCCAGTTT CATTAGAAGG TGATAGCCAA GAAGTATTTG TAGGAAGAAG CTTAATGAAC ACATCTGATA TATCAGATGG AATTTCAAAG CAAATTGATG AACAAGTCAG ATCAATAGTT AAAAAGTGCT ACCAAGAAAC ACTTGAATTG GTTGAAAAGA ATAGATCAGC CATGGATAAA TTGGTTGAAA TTTTAATCGA AAAGGAAACT ATGGATGGAG ATGAATTCTG CAAAATATTA TCTCAATATA CGACTATTCC TGAGAAAGAT AGATTTATAC CTGTTCTACC GGATGCAAAA TAG
|
Protein sequence | MDKKWKVVAL WVLPITIVIL ITWQILGSST NTQVNQTNTS NPSRNAPVAK ISYGRFLDYV KAGRVTSVDI YEGGRNAIVE SVDPEIDNRI QRLRVDLPGL APELVSSLKD EGISFDIHPP KTAPAGVGIL GNLLFPIILI GGLILLSRRS NSMPGGPGQA MQFGKTKARF AMEAETGVKF DDVAGVNEAK QDLEEVVTFL KQPERFTSVG AQIPRGVLLV GPPGTGKTLL AKAIAGEAGV PFFSLSGSEF VEMFVGVGAS RVRDLFKRAK ENSPCLIFID EIDAVGRQRG AGIGGGNDER EQTLNQLLTE MDGFEGNSGI IIIAATNRPD VLDSALMRPG RFDRQVTVDA PDISGRLSIL KVHSRNKKLE KDLTLESIAR RTPGFTGADL ANLLNEAAIL TARRRKNQIG LSEIDDAVDR IIAGMEGTPL VDGRSKRLIA YHEVGHALIG SLVKDHDPVQ KVTVIPRGQA QGLTWFSPDD DQSLISRAQL KARIMGALGG RAAEDIIFGR EEVTTGAGGD VQMVASMARQ MVTRFGMSSL GPVSLEGDSQ EVFVGRSLMN TSDISDGISK QIDEQVRSIV KKCYQETLEL VEKNRSAMDK LVEILIEKET MDGDEFCKIL SQYTTIPEKD RFIPVLPDAK
|
| |