Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0279 |
Symbol | |
ID | 3605651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 820522 |
End bp | 821481 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637687137 |
Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
Protein accession | YP_291474 |
Protein GI | 72382119 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.302119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTACCTT CCAAAGCAAA TGAAGATTTT CTTATCGCAA ATGCACATGC AAAAATTAAT CTACATTTAG AGGTTTTAGG TATTAGGAGC GATGGCTTTC ATGAATTAGC AATGGTCATG CAAAGTATTA ATTTAAGTGA TCAATTGAAA ATGATAAAAA GAGTAGATAA TACTATTAAT CTAAAATCTA ATAATAAAGA AATTAGTAAT GGTGACGATA ATCTAATAAT AAAAGCTGCA AAGCTGTTGA GAAATAAAGT AGAAAATCAA GAATTAGGTG TTGATATTGA ACTTGAGAAA AACATACCTA TTGGGGCAGG ATTGGCAGGG GGATCTACAG ATGCAGCTGC AACATTACTT GGATTAAATA AACTCTGGAA GCTAAATCTT AAGATTGATG AATTAGAGAA CCTATCAAAA GAAATAGGAT CAGATATCCC TTTTTGCATA TCAGGAGGGA GGCAAATATG TTTTGGTAGA GGTGAAATTT TAGAAAAATT GAAATTTGAT CAAATTCAGT TAGGTCTTGT TTTAGTTAAA GACCCTTCAA TACAAGTATC TACTCCAGTT GCATACAAAA AATATAAAGA GCAGTTTGGT GAAAGCTATC TTGAAGATGA TAGGGATTTT GAAATCAAAA GAAACTCTAT TAGATCTATT GACTGGTCTG ATCAGTCGCT TTTTGATAAT CGTAAAGAAA TACAAAATGA TTTACAAAAA AGCATTCGCC CTATGACACC AGAGGTTGAG AAGTCATTGA ATTTATTATC TAGTTTGCCA GATTCACGTC TTGTTTCAAT GAGTGGTTCT GGTCCAAGTT GTTTTGCCTT GTTTCAAAAT TATGACCAAG CAAATAAAGT ACTCAAAGAA CATGTTAACG AATTTGAAAG GGCTGGTTTA TCAGCTTGGG CATGTTCAAT GATGTCTAAT GGAGTTGAAT TAAGAAATGA ATTCACCTAG
|
Protein sequence | MVPSKANEDF LIANAHAKIN LHLEVLGIRS DGFHELAMVM QSINLSDQLK MIKRVDNTIN LKSNNKEISN GDDNLIIKAA KLLRNKVENQ ELGVDIELEK NIPIGAGLAG GSTDAAATLL GLNKLWKLNL KIDELENLSK EIGSDIPFCI SGGRQICFGR GEILEKLKFD QIQLGLVLVK DPSIQVSTPV AYKKYKEQFG ESYLEDDRDF EIKRNSIRSI DWSDQSLFDN RKEIQNDLQK SIRPMTPEVE KSLNLLSSLP DSRLVSMSGS GPSCFALFQN YDQANKVLKE HVNEFERAGL SAWACSMMSN GVELRNEFT
|
| |