Gene PMN2A_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0262 
Symbol 
ID3605634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp804412 
End bp805662 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content38% 
IMG OID637687120 
ProductRNA methyltransferase TrmH, group 3 
Protein accessionYP_291457 
Protein GI72382102 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC GCTTCAATAA AGACACAAGG AATTCAAAAA ACTCTTCATC TAATAAACGA 
AGTAGTAATT ATTCTCGTCA AGATAATGAC TCCAAAAAGT CAAACTTTAA TGATAGAAGA
AGAACCAATA ACAAAATAAA TCGTCATTCT TCTGATCAAG TAAATCAATA TTCATTAGGT
AAAGAATTTT CTGATCGATC AAGAAGTAGT AACGAGGCTA ATTCCAACTA CAGAGGATCT
AATCGATTCG AGAGGAAATC GACCAACTCT TCGTATAGAA ATCAAGACTC TCAGGAAACA
AACAATTACA GAGGATCTAA TCGATTCGAG AGGAAATCGA CCAACCCTGC GTACAGAAAT
AAAAATTCTC AGGGAGCTAG CAGTTATAAA AGAGAAGAAA ATAATGAACC TCTTTCATAT
TCTGAAAGCT TTAGCAAAAC ATTAAGTGAT GATCTGATTT GGGGCCGCCA TTCAACTGAG
GCAGCCCTTG TTGGCGGCAG GGCAATTCAC AGGATTTGGT GTACCTCCGA ATTACGCAGT
ACACCAAAGT TTTTTCAACT TCTCAAAGAT CAAAAAGCTT CTGGGGTCTT AGTTGAAGAA
GTTTCATGGT CAAGGCTTGG CCAGCTCACA AATGGTGCAG TCCATCAAGG AATAGTTTTA
CAAATTGCCG CATCAAAAAC ACTTGACTTG AAGAATTTAA TAGATGCTTG CAAAGCTTTT
GGTGATTCAT CATTGCTCTT AGCTTTAGAT GGCTTAACTG ATCCTCAGAA TCTTGGGGCA
ATAATTCGAT CTGCCGAAGC CCTCGGTGCT CAAGGATTAA TCCTTCCACA AAGACGAAGT
GCAGGATTAA CAGGATCCGT AGCAAAAGTT GCCGCTGGAG CTCTGGAACA TTTGCCTGTA
GCAAGAGTTG TTAATTTAAA TAGGTCTTTG GAGAAATTGA AAGATGAAGG TTATACCGTT
GTTGGCCTCG CTGAGGAGGG ATCATCTACT TTATCTGAAA TCAAATTTCA AGGTCCTTTA
GTAGTAGTAG TTGGCTCTGA AGATAAAGGA ATTTCTCTAA TAACTAGAAG ATTATGTGAT
CAGTTAGTAA GAATTCCTCT CAAGGGAGTC ACTACAAGCC TAAATGCATC AGTTGCTACG
TCTATTTTCT TATATGAAGT TGCTAGATCC AAATGGATGC GCTCAATCTC TGGACAAGAC
CCTTCTCCTA GATTATTGAA ACCTCAGATT TCATCTGAAA AGATTAACTA A
 
Protein sequence
MSYRFNKDTR NSKNSSSNKR SSNYSRQDND SKKSNFNDRR RTNNKINRHS SDQVNQYSLG 
KEFSDRSRSS NEANSNYRGS NRFERKSTNS SYRNQDSQET NNYRGSNRFE RKSTNPAYRN
KNSQGASSYK REENNEPLSY SESFSKTLSD DLIWGRHSTE AALVGGRAIH RIWCTSELRS
TPKFFQLLKD QKASGVLVEE VSWSRLGQLT NGAVHQGIVL QIAASKTLDL KNLIDACKAF
GDSSLLLALD GLTDPQNLGA IIRSAEALGA QGLILPQRRS AGLTGSVAKV AAGALEHLPV
ARVVNLNRSL EKLKDEGYTV VGLAEEGSST LSEIKFQGPL VVVVGSEDKG ISLITRRLCD
QLVRIPLKGV TTSLNASVAT SIFLYEVARS KWMRSISGQD PSPRLLKPQI SSEKIN