| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PMN2A_0164 |
|---|
| Symbol | |
|---|
| ID | 3605534 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL2A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007335 |
|---|
| Strand | - |
|---|
| Start bp | 718751 |
|---|
| End bp | 720082 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637687020 |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_291359 |
|---|
| Protein GI | 72382004 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | [TIGR02023] geranylgeranyl reductase
[TIGR02028] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.620405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGAG TTGCTGTTAT TGGCGGTGGG CCTAGTGGAT CATGCGCTGC AGAAATTTTA
GCTAAGGCAG GAATTAAAAC TTGGATTTTC GAGAGAAAGC TTGATAACGC AAAACCATGC
GGAGGAGCGA TTCCATTGTG TATGGTTTCT GAATTTGATC TTCCCGAATC AATTATTGAT
AGGAAAGTCA GGAACATGAA AATGATATCC CCATCAAACA GAGAAGTAGA TATTATTTTG
GATGATATCT ATCCAGGAAG CGATAAAGAA TATATAGGTA TGTTGAGGCG TGAGGTGATG
GATTCATTCA TGAGAAATCG CGCCGCTGAA CTTGGAGCAA CATTAGTAAA TGGATTGGTA
TCAAAAATAG AAACTGGTAC GAACAAACAA GGTCCCTACA CACTTCATTA CACCGAAATC
CTTAACGACA AATCCGAAGA GAAAGGTAAG CAACTTGAAG TGGATTTAAT TGTTGGAGCA
GATGGCGCAA CAAGCAGAGT TGCAAAAGCA ATGGATGCTG GTGATTACAA CTATGCAGTA
GCAATTCAAG AAAGGATAAA GCTTCCTAAA GAGGAAATGA AGTATTACGA AGATAGGGCC
GAAATGTATG TAGGCACAGA CGTATCGCCT GATTTCTATG GTTGGGTCTT TCCAAAATAT
GACCATGTAG CAGCTGGAAC AGGAACAATG AAACAAAATG GTGGTTTAAT AAAAAGTCTC
CAAATTGGCG TCAGAGAAAG AGCCAAGAAG AGACTCGTAA ATGGAGAAGT AATCAAAGTA
GAAGCTCATC CAATTCCTGA ACATCCCAGA CCAAGAAGAG TTGTTGGAAG AATGGCTCTA
GTCGGTGATG CCGCTGGTTA TGTAACCAAA AGCTCAGGAG AAGGAATTTA TTTTGCGGCC
AAAAGTGGAA GGATGTGTGC TGAGCAAATT GTCGAATCAA GTCAAAATGG AAAAATTATA
CCTACGGAAA ATGATCTCAA AAAATATCTA AAAAAATGGG ATAAAAAGTA TGGAATTACA
TATACAGTTT TAGATATTCT CCAACGAATT TTCTACACCA GTGATGGAGC AAGAGAGGCC
TTTGTAGAGA TGTGTGGTGA CATGGATGTT CAAAGACTTA CATTTGATAG TTATCTCTAC
AAAACTGTAG TTGCAATGAA GCCGCTTCAA CAATTAAAAC TTACCCTACT AACAATTGGT
TCTGTTTTAA GAGGGAAAGC ATTAGCACCA AGCACATATA AGCCAGTACC TAGTGCCGTC
AGAGACGATA AAGAAGTTAA TAAAATGTTA GCGGTAAGTT CAATTAAAGG TGGTATTAAA
GCCAGTAAAT AA
|
|---|
| Protein sequence | MLRVAVIGGG PSGSCAAEIL AKAGIKTWIF ERKLDNAKPC GGAIPLCMVS EFDLPESIID
RKVRNMKMIS PSNREVDIIL DDIYPGSDKE YIGMLRREVM DSFMRNRAAE LGATLVNGLV
SKIETGTNKQ GPYTLHYTEI LNDKSEEKGK QLEVDLIVGA DGATSRVAKA MDAGDYNYAV
AIQERIKLPK EEMKYYEDRA EMYVGTDVSP DFYGWVFPKY DHVAAGTGTM KQNGGLIKSL
QIGVRERAKK RLVNGEVIKV EAHPIPEHPR PRRVVGRMAL VGDAAGYVTK SSGEGIYFAA
KSGRMCAEQI VESSQNGKII PTENDLKKYL KKWDKKYGIT YTVLDILQRI FYTSDGAREA
FVEMCGDMDV QRLTFDSYLY KTVVAMKPLQ QLKLTLLTIG SVLRGKALAP STYKPVPSAV
RDDKEVNKML AVSSIKGGIK ASK
|
|---|
| |