Gene PMN2A_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0136 
Symbol 
ID3605506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp688929 
End bp689981 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content32% 
IMG OID637686992 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_291331 
Protein GI72381976 
COG category[R] General function prediction only 
COG ID[COG2603] Predicted ATPase 
TIGRFAM ID[TIGR03167] tRNA 2-selenouridine synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.303131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAGA AACCTACCAA TTCGAGCTAT CCCGTTACGG ATTTTCGAAA TTTAGCCAGC 
CCAATTATTG ATGTAAGAAG TCCCAGCGAA TTTTACCAAG GTCATTGGCC GGGTGCTGTT
AATATTCCTT TGTTTTCTGA TAGCGAAAGA GAGACAATTG GTAAAAGTTA TAAAAAAGAA
AGTCGCTTAA AAGCAATTCT TCATGGTTTA AAAGTAACCA TTCCTAATGC TAAAAATCTA
TTAGAAATAA TCCTTCAAAT CACCACAAAA GAAGAAGGAA AAAACAAATC ATTACGAATA
TATTGCTGGA GAGGTGGTAT GAGATCTAGT GCTTTTGCCT GGCTTGCTCG AACAATAGGT
ATTAGGACAT ATTTATTAAA AGGTGGATAT AAAACCTATA GAAAATGGGT CCTAAATCAA
TTTGAGGCTG ATTTACCAAT AAGACTTTTA GGAGGTAAAA CAGGTACAAG AAAAACAGAC
TTATTAAATT ATATAAATGA AGAAAATATA CATGTAATTG ATCTAGAGGG AATCGCTAAT
CATAGAGGGA GTAGTTTTGG TTCATTAGGT ATGAAGGAGC AGCCTTCAAC ACAACAATTT
GAAAATATTC TCGCAGAATC TCTTGATAGC TTTCAAAAAA ATAGCGCAAT AGAGATATGG
CTTGAAGCTG AAAGTTCTAA TCTAGGTAAG TGTCGTATAC CAAATAGTTT GTATACAAAA
ATGAAAAAAG CACCGATCAT AGAAATAATT AAAGACAAGG ATGAACGGGT AAAAAATTTA
GTCCATGTTT ATAGCCAAAA TTCTCAAACT GAATTAAATA ATGCTGTAAA TAGAATAAGT
AAAAGATTAG GTCCGCAAAG AACAAAAGAG GCATTAACGG CAATTAAAAG AAAAGAATGG
TCAAAAGCCT GTGAATCCAT GCTGGATTAT TATGACAAGT GTTATGAATA TGAGCTTAAG
AAAACAACTA ATATAAATTC AATTAATCTT AGTGGTTTAA GCCTAAAATC ATCATTAAAT
AAAATCTTAA ATGAGAAGCT CAATCCCTTA TAG
 
Protein sequence
MSEKPTNSSY PVTDFRNLAS PIIDVRSPSE FYQGHWPGAV NIPLFSDSER ETIGKSYKKE 
SRLKAILHGL KVTIPNAKNL LEIILQITTK EEGKNKSLRI YCWRGGMRSS AFAWLARTIG
IRTYLLKGGY KTYRKWVLNQ FEADLPIRLL GGKTGTRKTD LLNYINEENI HVIDLEGIAN
HRGSSFGSLG MKEQPSTQQF ENILAESLDS FQKNSAIEIW LEAESSNLGK CRIPNSLYTK
MKKAPIIEII KDKDERVKNL VHVYSQNSQT ELNNAVNRIS KRLGPQRTKE ALTAIKRKEW
SKACESMLDY YDKCYEYELK KTTNINSINL SGLSLKSSLN KILNEKLNPL