Gene PMN2A_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0061 
SymbolhisS 
ID3605430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp616268 
End bp617548 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content35% 
IMG OID637686916 
Producthistidyl-tRNA synthetase 
Protein accessionYP_291256 
Protein GI72381901 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.352385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCAATC TCAAGAATTT AAGAGGAATG GTAGATCTTT TACCTGCTCA GAGTCAGGGC 
TGGCAGAAGG TCGAATCAAT TGCACTTGAA CATTTTAGTC GAGCTGGGCT TCAAGAAATT
AGAACACCAA TTATTGAACA AACAGAATTG TTTTCAAGGG GGATTGGCGA AAATACTGAT
GTTGTAGGCA AAGAAATGTA TAGTTTCGAC GATAGGGGTG GTCGCTCTTG CACATTGAGA
CCTGAGGGTA CAGCATCTGT TGCGAGGTCA ATTGTTCAGC ATGGATTATT AAATAAAGGC
CCTCAAAGAC TTTGGTATAG AGGGCCAATG TTTAGATACG AGCGCCCTCA AGCAGGAAGA
CAAAGGCAGT TCCATCAAAT AGGAGTTGAA TTTGTTGGAT TAGCTTCTGT TATTAGTGAC
GCTGAAGTTA TTTCAATAGC TTGGAACTTT TTAAAGGATG TTGGTCTAAA TGAGTTGACT
TTAGAAATTA ATAGTCTTGG AAGTAATGAA GATCGCAATA TTTTCAAAGA AGAGTTAAAA
GATTGGCTTA ATCAGAGATT TGACTTGTTA GATGAAGATT CTCAGAAAAG AATTAATGTT
AATCCCTTGA GAATATTAGA TAGTAAAAAT AATTCTACAA AAGAACTTTT ATCTGAAGCT
CCTTCTTTAA TCGACTTTTT ATCTAATGAG AGTAAAACTA GATTTGATTA TTTACAGGAG
TTACTCGTTA ATCTAAAGAT TCCATATGAA ATTAATTATA ATTTGGTAAG AGGACTTGAT
TATTATTCTC ATACAGCTTT CGAAATAACA AGTGATCATT TAGGTTCTCA AGCTACCGTA
TGTGGAGGAG GACGTTACGA TGGTTTGATA AGTGAACTTG GGGGGCCTCA AGCTCCTTCT
ATCGGTTGGG CTATTGGAAT GGAAAGGCTT ATTATTCTAG CTGGAGATAA AATTTTACAG
TCAAAATCTC CAGATGTTTA TGTGATTCAT AAAGGTAAAA AAGCTGAGCA ACTTGCCTTG
GAAATTACTT GTCAGTTAAG GTCATCTAAC TTAATTATTG AATTGGACTA CTCAGGTTCA
TCTTTTTCAA AACAATTTAA GCGAGCAGAT AAAAGTAGGG CTAAATGGGC CTTAGTTATA
GGTGAGGATG AGGTATCTAA AGGTCAGTTA TTAATGAAGA AATTAAGGGA TAAACAAAAG
GATGAGGAGA GTAGGGAATA TATTTTCTCG AAGTCGGATC TAGATCAGTT AATTAAAAAG
TTGATTGCTG AAAAAAAATG A
 
Protein sequence
MTNLKNLRGM VDLLPAQSQG WQKVESIALE HFSRAGLQEI RTPIIEQTEL FSRGIGENTD 
VVGKEMYSFD DRGGRSCTLR PEGTASVARS IVQHGLLNKG PQRLWYRGPM FRYERPQAGR
QRQFHQIGVE FVGLASVISD AEVISIAWNF LKDVGLNELT LEINSLGSNE DRNIFKEELK
DWLNQRFDLL DEDSQKRINV NPLRILDSKN NSTKELLSEA PSLIDFLSNE SKTRFDYLQE
LLVNLKIPYE INYNLVRGLD YYSHTAFEIT SDHLGSQATV CGGGRYDGLI SELGGPQAPS
IGWAIGMERL IILAGDKILQ SKSPDVYVIH KGKKAEQLAL EITCQLRSSN LIIELDYSGS
SFSKQFKRAD KSRAKWALVI GEDEVSKGQL LMKKLRDKQK DEESREYIFS KSDLDQLIKK
LIAEKK