Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PMN2A_0053 |
Symbol | |
ID | 3605422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL2A |
Kingdom | Bacteria |
Replicon accession | NC_007335 |
Strand | + |
Start bp | 608419 |
End bp | 609504 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637686908 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_291248 |
Protein GI | 72381893 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAG ATCAATCTTT AATGTCAAAA CTGGGATTGT TTGCGGGATT TATTTTTTGT TCCAATCTCT TTATTTCTTT ACCTCTAAGA TCTGCTAGTG CTCTTGCCGC TTGGGCCTTA ACTAGCAACG GTAGTCTTAA ATTACGAACT TCCTCTGGGG CTAAATTAGA TGCTTTTTAT CAATCCTCAA CTACTGATAA GGGTGATAGG GTTTGGATCG ATTTCACTGG AGAATTAAGC CGCCCTAGGA CTATTAAAGG TAATGGATCA GTTAAGGAAA TCAGGCTAGG AAAACCCTCT AAGGGTATAA CAAGGCTTGT TATTGAATTC CTGCCATCAG TAGAATTAGA ACCCTCAAAA TTACAATTAA TTGGTATATC AACAAATACC TGGGAGTTGG AACTTATTGG TCTAGAAAGT AATTCTTTTC GTCCGATTGA AGAAGGTAAT ATTCTAAGAA ACTCAATAAA AAGAACTTAT GAAAAAATAA AGCCTGAAGA TTTAGATGTT TCTTCTTTAC CAAATGTACC CTATGGAAAG TATAAAGTTG TTATCGATCC AGGGCATGGT GGCTCAGACC CTGGTGCTGT TGGAATTAAT GGATTAAGAG AGACTGATAT TGTTTTAGAA GTGTCAAAGA GTGTTTCAGA TTTTCTAACA AATAAAGGAG TTAAAACTAT TTTAACTCGG AATTATGAGA GAACATTAGA CTTACAGCCA AGAGTTACCA AGGCTAATAA TTCAAAAGCA GATGTTTTTG TTAGTATTCA TGCAAATGCA ACACGAGGTA AGAGAAAAGA AGTTAACGGC TTAGAGACCT ATTATTACTC TGGTTATAAA GGCTATTCTT TAGCAAAAAA TATACAAAAA CAAATTTTGA TTGTTTCTCC GCAAAGTCCT GATAGGGGTG TTCGTAGATC ACGCTTTTAT GTGATAAGAA AAACATCAAT GCCTGCAGCT TTAGTAGAAA TTGGATTTGT TACTGGTATG TATGACGCCG ATTTGTTACG ACAAAAAGTT TATAGGGATA AAATGTCTTT TGCTATTGCT AGGGGAATAC TTAACTATCT AAAAATTTCA AATTAG
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Protein sequence | MFKDQSLMSK LGLFAGFIFC SNLFISLPLR SASALAAWAL TSNGSLKLRT SSGAKLDAFY QSSTTDKGDR VWIDFTGELS RPRTIKGNGS VKEIRLGKPS KGITRLVIEF LPSVELEPSK LQLIGISTNT WELELIGLES NSFRPIEEGN ILRNSIKRTY EKIKPEDLDV SSLPNVPYGK YKVVIDPGHG GSDPGAVGIN GLRETDIVLE VSKSVSDFLT NKGVKTILTR NYERTLDLQP RVTKANNSKA DVFVSIHANA TRGKRKEVNG LETYYYSGYK GYSLAKNIQK QILIVSPQSP DRGVRRSRFY VIRKTSMPAA LVEIGFVTGM YDADLLRQKV YRDKMSFAIA RGILNYLKIS N
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