Gene PMN2A_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0046 
Symbol 
ID3605415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp600123 
End bp601520 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content35% 
IMG OID637686901 
ProductUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 
Protein accessionYP_291241 
Protein GI72381886 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0770] UDP-N-acetylmuramyl pentapeptide synthase 
TIGRFAM ID[TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTA CTTTTAAGGA TTTAATTAAA CTTTGGGGGA CGCTAGATAA TCAAAAGGAA 
ATAGATCTTG ATTTACCTAT TGGTCGTATA TCTACTGATT CGAGGACAAT CGAAAAAGGT
GATTTCTTTG TCCCTTTGGT AGGTAATAAA TTTGATGCTC ATGATTACTT AGATATGGCT
TTTGATCTTG GTATACAGGC AGCAGTAGTT TCTGAAAAAT ATAATGGTTT GGTACCAATT
GGCCTACCTC ACTGGGTGGT TCCAGATACT CTGTACGCAT ATCAACAAAT CGCATTGCTT
CATCGAAGAA ATTTAAATCT TCCTGTAGTT GCTGTTACTG GCTCTGTTGG TAAAACAACT
ACAAGAGAAT TGATTCGAGC AATATTGTCT CCTCTTGGTG AAATTGTCTC TAGCAGAGGG
AATGAAAATA ATGATATAGG TGTTCCAAAA ACTTTGCTTA GTGGGTCGGA AACAGATGCT
GCATTTGTTC TTGAAATGGG TATGCGTGGT TTTGGTCAAA TTACACGTCT CTCTCGAGTC
GCTGAACCTG ATATAGCTGT AATTACAAAT GTGGGACAAG CTCATATTGG CATTCTTGGT
AGTAGAGAAA ATATTGCAAA AGCCAAGTCA GAAATCACCT CATACTTAAG CCCTGATGGT
GTTGTGATTA TTCCTTTTGG CGATTACATC TTAGAAAAAG CTTTGTTAGA AAAATGGTCA
GGACGTATTG TTCGAGTAGA GATAGAGGGC TTTTCACTGA ATTGGTTAGA TTGTAATAAT
GAGCATTTTG CTTTTCAAGA TATTGAACCA GATTATATTT CTCAAATTGA TATGCAAAAT
AATTTCATTC TTTTTGAGGG AAGAAAATTC AAATTGCCCC TTGAAGGAAG ACATAATGCT
ATGAATTTTC TTCTGGCATT AACTGTCGCA ACAGAATTAG GACTATCAAT AAAGAAACTT
GATCAATTAA AAATAAATAT GCCAATAGGA AGAAATAGAT TGGTTGATTG TGGACAATAT
TTAGTATTAG ATGAGACTTA CAATGCATCT CCTGAATCTG TTATTGCATC TCTAGAGTTA
TTGGTAAGCA AGCCTGGTAG ACATTTTGCG GTTTTAGGTA CGATGCTTGA GTTGGGCTCT
GAGAGTATTT TACTGCATCA GAAAGTTCTT AAAAAAGCAA TTGAATTAGG TCTAACTGGT
ATTGTTTTCG TCTCTTGTGG AGAGGAATCT AATATCATAA AAAAGACAAT TAAAGAATTA
CCAAATCATG ATGTAGTAAG TAACCCAAAA GATGCGGCCA TGTCTCTACT ACCATGGCTT
TCACCGGGAG ACAATATTTT AATTAAAGGT AGTCGTAAGT TGGAATTAGA AAAAGTATTA
CCTTATTTAC AGAAATAA
 
Protein sequence
MDITFKDLIK LWGTLDNQKE IDLDLPIGRI STDSRTIEKG DFFVPLVGNK FDAHDYLDMA 
FDLGIQAAVV SEKYNGLVPI GLPHWVVPDT LYAYQQIALL HRRNLNLPVV AVTGSVGKTT
TRELIRAILS PLGEIVSSRG NENNDIGVPK TLLSGSETDA AFVLEMGMRG FGQITRLSRV
AEPDIAVITN VGQAHIGILG SRENIAKAKS EITSYLSPDG VVIIPFGDYI LEKALLEKWS
GRIVRVEIEG FSLNWLDCNN EHFAFQDIEP DYISQIDMQN NFILFEGRKF KLPLEGRHNA
MNFLLALTVA TELGLSIKKL DQLKINMPIG RNRLVDCGQY LVLDETYNAS PESVIASLEL
LVSKPGRHFA VLGTMLELGS ESILLHQKVL KKAIELGLTG IVFVSCGEES NIIKKTIKEL
PNHDVVSNPK DAAMSLLPWL SPGDNILIKG SRKLELEKVL PYLQK