Gene PMN2A_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0021 
Symbol 
ID3605385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp570776 
End bp572353 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content40% 
IMG OID637686876 
Productalpha/beta fold family hydrolase 
Protein accessionYP_291216 
Protein GI72381861 
COG category[R] General function prediction only 
COG ID[COG2936] Predicted acyl esterases 
TIGRFAM ID[TIGR00976] putative hydrolase, CocE/NonD family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.162695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAA TAAGATACAG AGACGAAGAC TTACAACTTA GAGACGGAAC AGTACTCAAA 
TCTCGAATCT GGTCGCCTCA GGGGAATGGA CCATGGCCAG TCTTACTTAT GCGCCAACCA
TATGGAAGAG AAATTGCTTC TACAATTACT TATGCCCATC CATCTTGGTG GGCTAGCAAG
GGCTATCTAG TTGTCATACA AGATGTTCGT GGTCAAGGTG GGTCTGGAGG GGAATTTTCA
GGTTTCAATC AAGAAGCTTC AGACACTAGT CAAACTCATA ATTGGGTCCG ATCCTTGCCT
GAATGCAATG GTCTACTAGG CACATACGGT TTTTCATATC AAGGATTAAC ACAGCTCATT
GCGGAGGAAG GTACTCCCCC ACCTGATTGC ATTATTCCTG CAATGACAGG CCTTTCGGAG
GATGAACATT GGAGTTGTGA AGGAGGAGCG TTTTGGTGGC ACTTGGGAAT TGGATGGGGT
TTGCAATTAG CCGCCCAAAA AGCACAAAGA GAGAAGAATT GGAAAGGTTG GCATGAAATC
CGTGAAAATC TTGAATCGAA AAAATATTTA TATAACGGTC ATGATTTACT TGAAAAGTAT
GACCCAGAAG GGATGGCACA TAAATGGCTA AATCTTTCGT CAAGCAAAAC TCCTCAATGG
AAAACTCATA AGCCATTAAG TAGCTGGTTA AAAAAACCCT TGCTTCTAAT TGGGGGTTGG
TGGGATCCTC ATTTGAAAGG AATTTTAGAT ATTTTTGAGA AAGCTAAAAA GGCTGGAGGC
AATCCCAAAT TACTAATTGG TCCTGCTACT CATCTTCAAT GGTGGGAGGG AGCACAACGC
ACCCAGTTAG ATTTTTTTGA TTCTCATTTA AAAGAAAAAA ACAAAGAGAG TCATTTCTCT
CAAATCAATC TTTGGAACTT AACCACTAAG GGTTGGGAGC TTTCGGTTCA AAACAAAACT
CCCACTTGGA GTCTTCGAAG CGAAGGTTTA GCCTCAATAA ATCATCTTGA AGGATTCCTA
GCCCCGAATT CTGATTTAGA AGCAGATAGT GAGGTGAATT TAGTTCACGA CCCATGGAGA
CCCATACCTT CCATCGGAGG ACATCTGAGT GATACCGCTG GTGAAGCAAA CAGATATCAG
CTTGATATTC GACCTGATGT CGCAGTATTT ACATCAGACC CTATTTTGAA AGATCTTAGG
CTGGAGGGCA TTCCAACTCT TTTTTTAGAA ACTAACTGTG ACAGGGAATG TTTTGATCTA
TTTGTTGCAT TATCAATAAT TCCTAAAGCA GTAGAGAATA CTGTTACTCA ACTTTCGACG
GGTGTACTCA GAATTGCTGA TTGTGATAAA GGTATAACAA GTGCTAGAGA AATCAGACTT
CAACCTATTC TCGCCACATT TAAAAAAGGG GATCGTTTAA GAATTTCAAT TTCAGGATCT
GGATGGCCAG CAATTGGAAT AAATCCTGGT AAGAGTAAAT ATTTGTGCGA AGGACCTAGC
CCTAACTGCC TAGTGACAAC AATTTCACTC TTACTTTTAA ATTCAAAACT TAAATTTGAA
TCACTTATTT CCTCTTAG
 
Protein sequence
MNSIRYRDED LQLRDGTVLK SRIWSPQGNG PWPVLLMRQP YGREIASTIT YAHPSWWASK 
GYLVVIQDVR GQGGSGGEFS GFNQEASDTS QTHNWVRSLP ECNGLLGTYG FSYQGLTQLI
AEEGTPPPDC IIPAMTGLSE DEHWSCEGGA FWWHLGIGWG LQLAAQKAQR EKNWKGWHEI
RENLESKKYL YNGHDLLEKY DPEGMAHKWL NLSSSKTPQW KTHKPLSSWL KKPLLLIGGW
WDPHLKGILD IFEKAKKAGG NPKLLIGPAT HLQWWEGAQR TQLDFFDSHL KEKNKESHFS
QINLWNLTTK GWELSVQNKT PTWSLRSEGL ASINHLEGFL APNSDLEADS EVNLVHDPWR
PIPSIGGHLS DTAGEANRYQ LDIRPDVAVF TSDPILKDLR LEGIPTLFLE TNCDRECFDL
FVALSIIPKA VENTVTQLST GVLRIADCDK GITSAREIRL QPILATFKKG DRLRISISGS
GWPAIGINPG KSKYLCEGPS PNCLVTTISL LLLNSKLKFE SLISS