Gene PMN2A_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPMN2A_0005 
Symbol 
ID3605392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL2A 
KingdomBacteria 
Replicon accessionNC_007335 
Strand
Start bp555833 
End bp556897 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content37% 
IMG OID637686859 
Productdihydroorotase 
Protein accessionYP_291200 
Protein GI72381845 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGCTT CTGTTAATCA AATCTCATTA TTAAAGCCGG ATGATTGGCA TCTGCATTTG 
AGAGATGGAA AGATTCTTAA AGGTGTTTTA AGTCATACAG CTGATGTGTT TTGCCGTGCA
ATCATCATGC CTAATCTTGA TCCGCCAATA ACTACTTTAA GCCAAGCACA AGAGTATAAA
AAAAGAATTA TCCAGTCTAT CCCTAAAGGT GTTTCTTTTA CCCCATTAAT GACAGCATAT
CTTACAGATG ATATGCCTGC GAATGTCTTA GAGAGAGGCT TTAGAGAAGG TGTCTTTCAT
GGGGCAAAGC TCTATCCAGC TAATGTGACA ACTAATTCTT CTTATGGGGT TACAGATATA
AGTAAAGTCA GCAATTTATT TGAGACGATG GAAAGAATTG GTATGCCATT ATTGATTCAT
GGAGAAGTGA CCGATTTTAA TGTTGATGTA TTTGATAGAG AAGCTGTTTT TATTGAGCGT
CACCTTGAAC CACTATTACG AACATTTTCA TCACTTAAAG TGGTTTTAGA ACACATCACG
ACCATAGATG CAATTGACTT TGTAGAAAAA AGTGAGTTTG ATATAGCCGC TACAATCACA
CCTCATCATC TACATATCAA TCGAAACGCA ATGTTCAATG GTGGTTTAAG GAGTGATTTT
TACTGCTTAC CAACAGCTAA ACGTGAAATC CATCGTATTG CTCTAAGACA AGCGGCTACT
AGCGGTAAAC CTTGCTTTTT CCTGGGAACT GATTCAGCAC CTCATACCCG TAGATTTAAG
GAAAGTTCAT GTGGATGTGC AGGAATCTTT AATGCCCCTT TCGCTTTGGA AAGCTATTTA
AAAGTTTTCG AAGAGGAAAA TGCCCTAGAT AGGTTTGAAG CTTTTTCAAG TATTAATGGA
GCAACTTTTT ATGGATTACC TTTAAACACA GAGAGAATAA CTTTAATTAG AAAAGATATT
TCCGTACCTC AAATGATTGA TGTTGGATTA GATGGTGATC CCAATGATTT TGTAAAACCA
TTTCATTCAG GAGAAACTCT TAGATGGGCA ATAGAGGATG TTTAG
 
Protein sequence
MIASVNQISL LKPDDWHLHL RDGKILKGVL SHTADVFCRA IIMPNLDPPI TTLSQAQEYK 
KRIIQSIPKG VSFTPLMTAY LTDDMPANVL ERGFREGVFH GAKLYPANVT TNSSYGVTDI
SKVSNLFETM ERIGMPLLIH GEVTDFNVDV FDREAVFIER HLEPLLRTFS SLKVVLEHIT
TIDAIDFVEK SEFDIAATIT PHHLHINRNA MFNGGLRSDF YCLPTAKREI HRIALRQAAT
SGKPCFFLGT DSAPHTRRFK ESSCGCAGIF NAPFALESYL KVFEEENALD RFEAFSSING
ATFYGLPLNT ERITLIRKDI SVPQMIDVGL DGDPNDFVKP FHSGETLRWA IEDV