| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3109 |
|---|
| Symbol | |
|---|
| ID | 3580127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 3635579 |
|---|
| End bp | 3635902 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637686846 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_291165 |
|---|
| Protein GI | 72163508 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.168274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACCA TTCAGAATGT CACCGACGAC ACCTTCGAGG AGGTCGTCCT CAAGAGCAAG
CTGCCGGTCC TGGTCGACTT CTGGGCCGAG TGGTGCGCTC CCTGCAAGAT GATCGCCCCG
GTGCTGGAGC AGATCGCTGA AGAGCAGGAG GGCAAGCTCA CTGTCGTCAA GATCAACGCC
GACCAGAACC CGGACACCGT GCGCCAGTAC GGGGTGATGG GCCTGCCCAC CCTCAACCTC
TACAAGAACG GCGAAGTGGT CAAGCAGCTC GTTGGCGCTA AGCCCAAGCG CGTCATCGAG
AAGGAGCTCG AGGAGTTCCT GTAA
|
|---|
| Protein sequence | MATIQNVTDD TFEEVVLKSK LPVLVDFWAE WCAPCKMIAP VLEQIAEEQE GKLTVVKINA
DQNPDTVRQY GVMGLPTLNL YKNGEVVKQL VGAKPKRVIE KELEEFL
|
|---|
| |