| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3106 |
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| Symbol | |
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| ID | 3580124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3632936 |
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| End bp | 3633556 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637686843 |
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| Product | RNA polymerase sigma factor SigM |
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| Protein accession | YP_291162 |
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| Protein GI | 72163505 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACCGACG CAGTTCAGGA GATCCCCGAC AACGAGCTAC TGTTCAGGCA CAATCAGGGT
GACGAGCACG CCTTCAGCGA ACTGGTCAAA CGGCACCACG CTCGGCTGTG GGCAGTAGCG
ATCCGGGTTC TAGGCGACCA GGAAGAGGCC GCCGACGCGC TGCAGGATGC TTTCCTTTCT
GCTTTCCGCA GCGCACACCG CTTCCGGGGG GAGGCGATGG TCAGCACGTG GCTGCACCGG
ATCGTCATCA ACGCCTGCCA CGACCGGCTG CGCCGCAAAA TGGTCCGCCC CGCCGTGCCC
ACCGAGGACA CTGCGCTCGA CCTTCTCTCC AACGAGCGGG GCCGGTCCGC GCCCGACCCC
ACCGGCCGCA GCGACACCTC CCTCGACGTC CACGCTGCCC TGGGGTACCT TCCCGTGGAG
CAGCGCCTCG CCCTGGTCCT CGTCGACATG CTCGGCTACC GGGTCGAGGA TGCCGCAAAA
ATCCTCGACG TCGCTCCGGG TACCGTGAAG AGCCGGTGTG CGCGAGGCCG CGCTAGGCTT
CTCCCATATC TCGCCCATCT CAGGAACCCC AGCGACTCGT CAAACGTCCC ATCTCCGAAA
GGAGGTGGCA GGAGATCGTG A
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| Protein sequence | MTDAVQEIPD NELLFRHNQG DEHAFSELVK RHHARLWAVA IRVLGDQEEA ADALQDAFLS
AFRSAHRFRG EAMVSTWLHR IVINACHDRL RRKMVRPAVP TEDTALDLLS NERGRSAPDP
TGRSDTSLDV HAALGYLPVE QRLALVLVDM LGYRVEDAAK ILDVAPGTVK SRCARGRARL
LPYLAHLRNP SDSSNVPSPK GGGRRS
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