| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3075 |
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| Symbol | |
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| ID | 3580075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3596978 |
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| End bp | 3598498 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637686812 |
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| Product | putative phytoene desaturase |
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| Protein accession | YP_291131 |
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| Protein GI | 72163474 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.873802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACCG TGAGCGGCCC GACGGACCAC GTCGTCGTGG TGGGGGCAGG CCTGTCCGGG
CTCGCCGCAA CCCTGCACCT GCTCGGTGCG GGACGCCGGG TCACCGTCTT TGAGCGTGAG
GAGTACCCGG GCGGCCGGGC GGGACAGCTC GACCTGGACG GCTTCCACAT CGACACCGGT
CCGACCGTGC TCACCATGCC CGACCTGCTC GACGAGGCAC TGGCCGCGGT AGGCGAATCC
CTCAGCGACC GCCTCGACCT GGTCCAGCTC TCCCCCGCGT ACCGTGCCGT CTTCCCCGAC
GGATCGGTGC TCAACGTCCA CACCAACGCG GACGCTATGG CCGACGAGGT CGCTCGCGTG
TGCGGATCAC ACGACGCCAA GGGGTACCTG CGGCTACGCG CCTGGCTGCG GGAACTGTAC
GAGCTGGAGA TGGCCCGGTT CATCGACACG AACTTCGACT CCCCGTTCAC GCTCCTCTCC
CCCGAGCTTG TCCGGCTGGC CGCCCTCGGC GGTTTCCGGA GCCTCTCCGC GGCGGTAGGC
CGGTTCGTCC GCGACGAGCG GCTGCGCCGC ATCTTCTCGT TCCAGTCCCT GTACGCGGGG
GTACCACCGC ACCGCGCCCT CGCCGCTTAC GCGGTCATCG CGTACATGGA CACCGTCGCC
GGCGTCTACT TCCCGCGCGG CGGCATGCGT TCCCTGGGAG AAGCCCTGGC CGCCGCAGCC
ACCAAAGCCG GGGCGGAACT GCACTACGGA AGGACTGTCA CCCGGCTGGA ACGGCGCGGC
AACCGAGTGC GTGCCGTGGT GCTTGCCGAC GGGGAACGGG TGCCCTGCGA CGCCGTGGTC
GTCACCGTGG ACCTGCCCTT GGCCTACCGT CTCCTCGGCC GGACCCCGTG GCGGATCGTC
CCCCTCCAGT TCGCTCCCTC CGCGGTCGTC CTCCACGCGG GCACCGACCG CACCTGGCCG
GTGCTCGACC ACCACACCCT CCTGTTCGGC ACGGCGTGGC GGCGTACTTT CACCGAGATC
ACCCGGTTGG GGAAACCGAT GAGCGACCCT TCGCTCCTGG TGACGCAGCC GACCGTGACC
GACCGCAGCC TGGCCCCGCC TGGGCGGCAC CTGCTCTCCG TGGTCGCGCC CTGCCCGAAT
CTGCGCACTG GGCGGATCGA CTGGGTGTCC TTCGGCCCTC GCTACCGGGA GCAGCTCGGA
GCAGTCCTGG AGGACCGCGG CCTCACCGGA TTCTCCGAGT CTGTGCGCGT CGAACGGCTC
GTCACCCCGC ACGACTGGTC GCACATGGGG CACGCGTTCG GCACCCCGTT CGCTACCGCG
CACACCCTCT TCCAGACCGG TCCGTTCCGG CCGCGCAACC TCGTGTCGGG GATCGCCAAC
GCGGTCTTGG CGGGATGCGG GACCACTCCG GGGGTGGGCC TGCCGACGGT CCTCATCTCG
GGGAAGCTCG CCGCGGCACG GATCACCGGG TGCACCTCGC CCACGCGGTC CACGATCACC
GGTTCGGGGA GACGGCGGTG A
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| Protein sequence | MRTVSGPTDH VVVVGAGLSG LAATLHLLGA GRRVTVFERE EYPGGRAGQL DLDGFHIDTG
PTVLTMPDLL DEALAAVGES LSDRLDLVQL SPAYRAVFPD GSVLNVHTNA DAMADEVARV
CGSHDAKGYL RLRAWLRELY ELEMARFIDT NFDSPFTLLS PELVRLAALG GFRSLSAAVG
RFVRDERLRR IFSFQSLYAG VPPHRALAAY AVIAYMDTVA GVYFPRGGMR SLGEALAAAA
TKAGAELHYG RTVTRLERRG NRVRAVVLAD GERVPCDAVV VTVDLPLAYR LLGRTPWRIV
PLQFAPSAVV LHAGTDRTWP VLDHHTLLFG TAWRRTFTEI TRLGKPMSDP SLLVTQPTVT
DRSLAPPGRH LLSVVAPCPN LRTGRIDWVS FGPRYREQLG AVLEDRGLTG FSESVRVERL
VTPHDWSHMG HAFGTPFATA HTLFQTGPFR PRNLVSGIAN AVLAGCGTTP GVGLPTVLIS
GKLAAARITG CTSPTRSTIT GSGRRR
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