| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_3068 |
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| Symbol | |
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| ID | 3580044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3584976 |
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| End bp | 3585872 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637686801 |
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| Product | rhomboid family protein |
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| Protein accession | YP_291124 |
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| Protein GI | 72163467 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000231601 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCT CTCCCAGTTC TGAACCGACG TCCCAGGCGG TCCCGGTCTG CTACCGACAC
CCAGGGCGCG AGACCTATGT CCGGTGCCGC CGGTGCAACC GGTACATCTG CCCGGACTGC
ATGCGGGAGG ACTCGGTCGG GTTCCAGTGC GTGGAATGCG TCGCTGAGGG GAACCGGAGT
GTGCGAGAGG CGCGCACCGT CTTCGGGGGC AGGATCATCG CCAAGCCCTA TGTGACCTGG
GCGCTGCTGG GGCTGATCGG TGCAGTGTTC GCGGCCCAGG TCGTGTCCTC GGGCGGTCTC
GTCCGGCTCG GCACCACCGC TGATCCGCTC GTCTACGAGT TCGGGATGTG GGGCGGGGCG
GTCCTGGCGT GGCACCAGTG GTACCGCCTG CTCACCGGGG TGTTCCTGCA CGGCGGCCTC
ATGCACTTGG CGTTCAACGG GTTCGCGCTG TACGTGCTGG GGCCGCAGTT GGAGCGGTGG
CTCGGCCACC TGCGTTACGC GGCACTGTGG GGAGTGAGCG CCCTCGGCGG GTCGGTGCTT
GGACTGCTGG TGCAGCCGAC AGTGATGTCG GTGGGGGCGT CTGGGGCGAT CTTCGGACTG
TTCGGCGCGG TCTTCGTGTT CGGTAAGCGG CTCAGGTTGG ACACCCGGTT CATCCTGGGC
CTGCTTGTCG CCAACCTGTT GATCACCTTC CTGGTGCCGG GGATTTCCTG GACCGCGCAC
ATCGGCGGTC TCGTGAGCGG TCTGCTGCTG GGCTTGGGGT ATGCCTACCT TCCGCCGAAG
GCGGGCAGGG AGAGCAAGCC GTGGCAGCGC GCGCTCTGGC ACGGAGGGGT CACCGTGGCC
TACCTGGTGC TGCTGGGCGT CGCGATAGCG GTGGCACCGA TCGCGTCGCT GGGGTGA
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| Protein sequence | MSASPSSEPT SQAVPVCYRH PGRETYVRCR RCNRYICPDC MREDSVGFQC VECVAEGNRS
VREARTVFGG RIIAKPYVTW ALLGLIGAVF AAQVVSSGGL VRLGTTADPL VYEFGMWGGA
VLAWHQWYRL LTGVFLHGGL MHLAFNGFAL YVLGPQLERW LGHLRYAALW GVSALGGSVL
GLLVQPTVMS VGASGAIFGL FGAVFVFGKR LRLDTRFILG LLVANLLITF LVPGISWTAH
IGGLVSGLLL GLGYAYLPPK AGRESKPWQR ALWHGGVTVA YLVLLGVAIA VAPIASLG
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