Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3044 |
Symbol | |
ID | 3580807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3558418 |
End bp | 3560832 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637686776 |
Product | trehalose 6-phosphate phosphorylase |
Protein accession | YP_291100 |
Protein GI | 72163443 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.886681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCGT GGCTGCTGCG CTACGACGGT TTCGACCCTG CCACGGAAGG ACTCCGGGAA GCGCTGTGCA CCCTCGGCAA CGGCGTGTTC GCCACCCGGG GCGCAGCCCC CGAATCCCGA GCCGACGGAG TGCACTATCC CGGCACCTAC CTTGCCGGCT GCTACAACCG GCTCACCTCC ATCGTCGCCG ACCACGAAGT CACCAACGAA GACCTCGTCA ACATCCCCAA CTGGCTGCCG TTCACCTTCC GCGCCGCCGA CGGGTCATGG CTCGGCGACG GCGCCGAGCT CACCGACCAG CAGCTCGAAC TCGACATGCG GCGCGGAGTG CTGACCCGCA CCGGAACCGT GGTCGACAAG GAAGGCCGCC GCACCCGGCT CGTCCAACGC CGCCTCGTCT CCATGGACGA CCGGCACCTC GCCGCATTGG AAACCACCCT CATCCCAGAA AACTGGGCCG GGCCGCTCAC TGTCCGAGTC GGCTTGGACG GGCGAGTCAC CAACAGCGGG GTTGCCCGCT ACCGGGACCT CAACAGCGAC CACCTGCGCC CAGGCGGCAC CGAGGGCGAT GAAGCAGGCC GCATGTGGCT GCGCTGCCGG ACCTCCACCT CCGACATCGA AATCGTCCTC GCGGCCCGCA CCACGGTCAC CACGGGACCA GCACCCCAGA AAACCCAGGT GACTTGCCAA GACGAACTAG TGGAACAGAC CCTGGAGATT CCCGCAGCCC AAGGGGAACA GGTCACGGTG GAGAAGATCG TGGCCGTCTA CTCTTCCCTC GACCACGCGG TCAGCAACCG CAGGGAAGCG GCCCGTGCCG CCGTCGAACA CGCCGCCGAC TTCACCGGCC TGCTCCACCG CCACGCCACC GCGTGGCGGC ACCTGTGGCG CCGCTGCGAC GTGACCATCA GCAACCCCGA GCACACCATG GTGCTCCACC TGCACCTGTT CCACATCCTG CAGACCCTGT CCCCCCACAC CGCCGACCTC GACGTGGGCA TGCCCGCGCG CGGCCTGCAC GGGGAGGCCT ACCGGGGGCA CGTGTTCTGG GACGAACTCT TCGTCTTCCC CTTCCTCAAC ACCCGGTTCC CGCAGATCGC GCGCTCCCTG CTGCGCTACC GGTGGCGGCG CCTGCCCGCC GCGCGCGCTG CCGCCCGGGC CGCCGGCTAC CGCGGCGCCA TGTTCCCCTG GCAGAGCGGC ATGGACGGCC GGGAGGAAAC CCAGCGCCTG CACCTCAACC CGCGCTCCGG GCATTGGATT CCCGACGCCT CCCACCTGCA ACGCCACGTG GGTCTCGCCA TCGCCTACAA CGTGTGGCAG CACTACCAGG TCACCGAGGA CGTGGACTTC CTCCTCGACT TCGGGGCCGA ACTGCTCGTG GACATCGCCC GGTTCTTCGC TTCGCTCGCC ACATTCGACC GGTCCCAGAA CCGGTATGTG ATCCGCGGAG TCATGGGGCC GGACGAATAC CACGAGGGCT ACCCCGACCG GGACGAGCCC GGCCTCGACG ACAACGCCTA CACCAACATC ATGGCCGTGT GGGTACTGCG GCGGGCCCTC GACGTCCTGC GGATCCTGCC CGACGGCAGC CGGGCTGAAC TCATGGAACG CCTCGGCATG GGGCTCGACG AGCTAGCGCT GTTCGAAGAC GTGCGCACCC GCATGCGCGT GCCCTTCCAC GAAGGGGTCA TCAGCCAGTT CGCGGGCTAT GAGCACCTCG TCGAACTCGA CTGGGAGCAC TACCGGAACA CGTACGGCGA CATCCGCAGG CTCGACCGGA TCCTGGAAGC AGAAGGGGAC ACCTGCGACC GGTACAAGGT GTCTAAACAA GCCGACGTGC TCATGCTCTT CTTCCTGCTG TCCCCGGACG AGTTCGCCGA CATCCTCACC GACCTGGGCT ACGAGTACGA TCCCGGCCTC ATCCCGCGCA CCATCCACTA CTACCTGGCC CGCACCTCCC ACGGGTCGAC GCTGAGCGCC GCCGTCCACG CCTGGGTCAT GGCCCGCACC CGGCACACGG CCTCATGGCA GTTCTTCGTG GAAGCGCTGC GCTCCGACAT CGCCGACGTG CAAGGCGGCA CCACCGCGGA AGGCATCCAT CTGGGGGCGA TGGCGAGCAC CGTCGACCTG GTCACCCGCT GCTACACCGG CTTGGAGATC CGCCACGGCG TGCTGCACCT CGACCCGGAG CTGCCCTCCG AGATCGACTC CCTCTCCTTC GTCCTGCCCT ACCAAGGCCA TTGGGGAATC CGGCTGTCGT TCCACCGCAA CGAGGTGCGC ATCAGCGTGC CGCCTTCCAC CGCTCCCCCC GTTACCGTGC ACGTGGCGGG GCAGACCGCG CGCGTGCCTG CCGGCTGCGA CCACGTGTTC GTCCTGGGAG GCGGCGCTTC CCAGGACCAA GGTCCCCCGC TGTGA
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Protein sequence | MNPWLLRYDG FDPATEGLRE ALCTLGNGVF ATRGAAPESR ADGVHYPGTY LAGCYNRLTS IVADHEVTNE DLVNIPNWLP FTFRAADGSW LGDGAELTDQ QLELDMRRGV LTRTGTVVDK EGRRTRLVQR RLVSMDDRHL AALETTLIPE NWAGPLTVRV GLDGRVTNSG VARYRDLNSD HLRPGGTEGD EAGRMWLRCR TSTSDIEIVL AARTTVTTGP APQKTQVTCQ DELVEQTLEI PAAQGEQVTV EKIVAVYSSL DHAVSNRREA ARAAVEHAAD FTGLLHRHAT AWRHLWRRCD VTISNPEHTM VLHLHLFHIL QTLSPHTADL DVGMPARGLH GEAYRGHVFW DELFVFPFLN TRFPQIARSL LRYRWRRLPA ARAAARAAGY RGAMFPWQSG MDGREETQRL HLNPRSGHWI PDASHLQRHV GLAIAYNVWQ HYQVTEDVDF LLDFGAELLV DIARFFASLA TFDRSQNRYV IRGVMGPDEY HEGYPDRDEP GLDDNAYTNI MAVWVLRRAL DVLRILPDGS RAELMERLGM GLDELALFED VRTRMRVPFH EGVISQFAGY EHLVELDWEH YRNTYGDIRR LDRILEAEGD TCDRYKVSKQ ADVLMLFFLL SPDEFADILT DLGYEYDPGL IPRTIHYYLA RTSHGSTLSA AVHAWVMART RHTASWQFFV EALRSDIADV QGGTTAEGIH LGAMASTVDL VTRCYTGLEI RHGVLHLDPE LPSEIDSLSF VLPYQGHWGI RLSFHRNEVR ISVPPSTAPP VTVHVAGQTA RVPAGCDHVF VLGGGASQDQ GPPL
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