Gene Tfu_3044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_3044 
Symbol 
ID3580807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp3558418 
End bp3560832 
Gene Length2415 bp 
Protein Length804 aa 
Translation table11 
GC content68% 
IMG OID637686776 
Producttrehalose 6-phosphate phosphorylase 
Protein accessionYP_291100 
Protein GI72163443 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.886681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGT GGCTGCTGCG CTACGACGGT TTCGACCCTG CCACGGAAGG ACTCCGGGAA 
GCGCTGTGCA CCCTCGGCAA CGGCGTGTTC GCCACCCGGG GCGCAGCCCC CGAATCCCGA
GCCGACGGAG TGCACTATCC CGGCACCTAC CTTGCCGGCT GCTACAACCG GCTCACCTCC
ATCGTCGCCG ACCACGAAGT CACCAACGAA GACCTCGTCA ACATCCCCAA CTGGCTGCCG
TTCACCTTCC GCGCCGCCGA CGGGTCATGG CTCGGCGACG GCGCCGAGCT CACCGACCAG
CAGCTCGAAC TCGACATGCG GCGCGGAGTG CTGACCCGCA CCGGAACCGT GGTCGACAAG
GAAGGCCGCC GCACCCGGCT CGTCCAACGC CGCCTCGTCT CCATGGACGA CCGGCACCTC
GCCGCATTGG AAACCACCCT CATCCCAGAA AACTGGGCCG GGCCGCTCAC TGTCCGAGTC
GGCTTGGACG GGCGAGTCAC CAACAGCGGG GTTGCCCGCT ACCGGGACCT CAACAGCGAC
CACCTGCGCC CAGGCGGCAC CGAGGGCGAT GAAGCAGGCC GCATGTGGCT GCGCTGCCGG
ACCTCCACCT CCGACATCGA AATCGTCCTC GCGGCCCGCA CCACGGTCAC CACGGGACCA
GCACCCCAGA AAACCCAGGT GACTTGCCAA GACGAACTAG TGGAACAGAC CCTGGAGATT
CCCGCAGCCC AAGGGGAACA GGTCACGGTG GAGAAGATCG TGGCCGTCTA CTCTTCCCTC
GACCACGCGG TCAGCAACCG CAGGGAAGCG GCCCGTGCCG CCGTCGAACA CGCCGCCGAC
TTCACCGGCC TGCTCCACCG CCACGCCACC GCGTGGCGGC ACCTGTGGCG CCGCTGCGAC
GTGACCATCA GCAACCCCGA GCACACCATG GTGCTCCACC TGCACCTGTT CCACATCCTG
CAGACCCTGT CCCCCCACAC CGCCGACCTC GACGTGGGCA TGCCCGCGCG CGGCCTGCAC
GGGGAGGCCT ACCGGGGGCA CGTGTTCTGG GACGAACTCT TCGTCTTCCC CTTCCTCAAC
ACCCGGTTCC CGCAGATCGC GCGCTCCCTG CTGCGCTACC GGTGGCGGCG CCTGCCCGCC
GCGCGCGCTG CCGCCCGGGC CGCCGGCTAC CGCGGCGCCA TGTTCCCCTG GCAGAGCGGC
ATGGACGGCC GGGAGGAAAC CCAGCGCCTG CACCTCAACC CGCGCTCCGG GCATTGGATT
CCCGACGCCT CCCACCTGCA ACGCCACGTG GGTCTCGCCA TCGCCTACAA CGTGTGGCAG
CACTACCAGG TCACCGAGGA CGTGGACTTC CTCCTCGACT TCGGGGCCGA ACTGCTCGTG
GACATCGCCC GGTTCTTCGC TTCGCTCGCC ACATTCGACC GGTCCCAGAA CCGGTATGTG
ATCCGCGGAG TCATGGGGCC GGACGAATAC CACGAGGGCT ACCCCGACCG GGACGAGCCC
GGCCTCGACG ACAACGCCTA CACCAACATC ATGGCCGTGT GGGTACTGCG GCGGGCCCTC
GACGTCCTGC GGATCCTGCC CGACGGCAGC CGGGCTGAAC TCATGGAACG CCTCGGCATG
GGGCTCGACG AGCTAGCGCT GTTCGAAGAC GTGCGCACCC GCATGCGCGT GCCCTTCCAC
GAAGGGGTCA TCAGCCAGTT CGCGGGCTAT GAGCACCTCG TCGAACTCGA CTGGGAGCAC
TACCGGAACA CGTACGGCGA CATCCGCAGG CTCGACCGGA TCCTGGAAGC AGAAGGGGAC
ACCTGCGACC GGTACAAGGT GTCTAAACAA GCCGACGTGC TCATGCTCTT CTTCCTGCTG
TCCCCGGACG AGTTCGCCGA CATCCTCACC GACCTGGGCT ACGAGTACGA TCCCGGCCTC
ATCCCGCGCA CCATCCACTA CTACCTGGCC CGCACCTCCC ACGGGTCGAC GCTGAGCGCC
GCCGTCCACG CCTGGGTCAT GGCCCGCACC CGGCACACGG CCTCATGGCA GTTCTTCGTG
GAAGCGCTGC GCTCCGACAT CGCCGACGTG CAAGGCGGCA CCACCGCGGA AGGCATCCAT
CTGGGGGCGA TGGCGAGCAC CGTCGACCTG GTCACCCGCT GCTACACCGG CTTGGAGATC
CGCCACGGCG TGCTGCACCT CGACCCGGAG CTGCCCTCCG AGATCGACTC CCTCTCCTTC
GTCCTGCCCT ACCAAGGCCA TTGGGGAATC CGGCTGTCGT TCCACCGCAA CGAGGTGCGC
ATCAGCGTGC CGCCTTCCAC CGCTCCCCCC GTTACCGTGC ACGTGGCGGG GCAGACCGCG
CGCGTGCCTG CCGGCTGCGA CCACGTGTTC GTCCTGGGAG GCGGCGCTTC CCAGGACCAA
GGTCCCCCGC TGTGA
 
Protein sequence
MNPWLLRYDG FDPATEGLRE ALCTLGNGVF ATRGAAPESR ADGVHYPGTY LAGCYNRLTS 
IVADHEVTNE DLVNIPNWLP FTFRAADGSW LGDGAELTDQ QLELDMRRGV LTRTGTVVDK
EGRRTRLVQR RLVSMDDRHL AALETTLIPE NWAGPLTVRV GLDGRVTNSG VARYRDLNSD
HLRPGGTEGD EAGRMWLRCR TSTSDIEIVL AARTTVTTGP APQKTQVTCQ DELVEQTLEI
PAAQGEQVTV EKIVAVYSSL DHAVSNRREA ARAAVEHAAD FTGLLHRHAT AWRHLWRRCD
VTISNPEHTM VLHLHLFHIL QTLSPHTADL DVGMPARGLH GEAYRGHVFW DELFVFPFLN
TRFPQIARSL LRYRWRRLPA ARAAARAAGY RGAMFPWQSG MDGREETQRL HLNPRSGHWI
PDASHLQRHV GLAIAYNVWQ HYQVTEDVDF LLDFGAELLV DIARFFASLA TFDRSQNRYV
IRGVMGPDEY HEGYPDRDEP GLDDNAYTNI MAVWVLRRAL DVLRILPDGS RAELMERLGM
GLDELALFED VRTRMRVPFH EGVISQFAGY EHLVELDWEH YRNTYGDIRR LDRILEAEGD
TCDRYKVSKQ ADVLMLFFLL SPDEFADILT DLGYEYDPGL IPRTIHYYLA RTSHGSTLSA
AVHAWVMART RHTASWQFFV EALRSDIADV QGGTTAEGIH LGAMASTVDL VTRCYTGLEI
RHGVLHLDPE LPSEIDSLSF VLPYQGHWGI RLSFHRNEVR ISVPPSTAPP VTVHVAGQTA
RVPAGCDHVF VLGGGASQDQ GPPL