Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_3043 |
Symbol | |
ID | 3580806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3557639 |
End bp | 3558421 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637686775 |
Product | HAD family beta-phosphoglucomutase hydrolase |
Protein accession | YP_291099 |
Protein GI | 72163442 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR02009] beta-phosphoglucomutase family hydrolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.720241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGGTGC GCGACACAAC CAGGCAGGTT CTTCCGCTCG ACCGGATCAC CGCGGTGCTC TTCGACATGG ACGGGGTGAT CACAGACACC GCGTCCGTGC ATGCGGCCGC CTGGAAACGG ACCTTCGACG AGTTCCTCCT CGACCTGTCC CGCAGTGGCG GGCCCCCGTT CCGGCCGTTC GACCTCATCG AGGACTACCG CCGCCATGTG GACGGCAAGG CACGGACCGC AGGCATCCGC GACTTTCTCG CCTCCCGCGG CCTCACCCTG CCTGACACCG CGCCACCCGA CCGGCCCGAA ACCATGACCG TGGCGACGCT GGGCGACCGC AAAGACCGCT ACTTCAAGGA CTACATCGAC CAGTACGGCG TCACCGCCTA CCCTGCCACG GTCCGGCTCA TCCACCGCCT GCGGGAGCGG GGCATCCGCC TCGCCGTGGT CTCCGCGAGC CGCAACTGCG CCGCAGTGCT GCGCGCTGCC GGAATCAGCG ACCTGTTCGA CGTCCGGGTT GACGGGGTTG ACGCGGCCCG GCTGCGTCTG CCCAGCAAAC CCGACCCTGC CCTGTTCCTG GAAGCGGCCC GCCGGTTAGA CGCCTCCCCC GCTACCACCG CGGTCGTCGA AGACTCCCTA TCCGGGGTCG AAGCGGGCCG ACGCGGCGGT TTTGCCCTGG TCATCGGGGT CGACCGGGCG CATCAGCGCG CCGCACTCTA CGAGAAAGGG GCGCACATCG TCGTGTCCAG CTTGGCGAGC CTGGAACTCA CTGGTGCGGA GGTATCGCCA TGA
|
Protein sequence | MTVRDTTRQV LPLDRITAVL FDMDGVITDT ASVHAAAWKR TFDEFLLDLS RSGGPPFRPF DLIEDYRRHV DGKARTAGIR DFLASRGLTL PDTAPPDRPE TMTVATLGDR KDRYFKDYID QYGVTAYPAT VRLIHRLRER GIRLAVVSAS RNCAAVLRAA GISDLFDVRV DGVDAARLRL PSKPDPALFL EAARRLDASP ATTAVVEDSL SGVEAGRRGG FALVIGVDRA HQRAALYEKG AHIVVSSLAS LELTGAEVSP
|
| |