| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2956 |
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| Symbol | |
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| ID | 3580355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 3466344 |
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| End bp | 3467705 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637686687 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_291012 |
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| Protein GI | 72163355 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.482149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGAATC TCATAGGATC AGCTTTCGGT CATCCCTTAT CACCCCTTGT GTCTTTTGTG
CCTCGCCCCC GGGCACGTGA CTCCGCCGAG TCCCACACAC CAGTGGAAGT CTCCATGTCC
GACGACGCCC GTCCGTCCAC CCCCTCTCCC GAGGACCCGC CACCACGCCG CCGTAGCCTC
CGCCGGGTCC TGGTGTGGAC GTCGATCCTT CTGAGCGCGG CCCTGATCGC CTGCCTCGGC
ACGGCATACG CCTACTACCG GTCCCTGCGC GCCAACATGG TCCAGCACGA TCTCGTCGCC
CTGCTCCCCG AAGAAGAGCG GCCCCCTAAA ATCGGCGACG CCGTCAACAT CCTCTTCATC
GGCTCCGACG GGCGCGAGGG AGGCAACGCC GCCTACGGCG GACGGGACTT CGTCGGGGAA
CGCTCCGACT CCCTGCTGCT GGCGCACATC TCCCCGGAGA ACAGGGTCAT CGTGGTGAGC
TTTCCCCGCG ACTCGCTCGT GGACCTGCCG GCCTGCGACC CGTACGGGGA GACCGAAGGC
ACCTACGGCT ACTACGGCAT GATCAACGCC GCCCTGTTCC ACGGTGGACC GCCCTGCGTG
GTGAAGACGA TCGAATCGCT CACCCAGATC CGCATCGACC ACTTCGTGCA CCTGAGCTTC
GTAGGGTTCC GGGAGATGGT GGACGCCCTC GGCGGCGTCG AAATGTGCAT CCCCGTCCCC
CTCCACGACG AGCGGTCCAA ACTCGACATA GAAGCGGGCA CCCAGGTGCT CGACGGGGAG
CAGGCGCTGG CTTTCGTCCG CGCCCGCTAC GAGATCGGCG ACGGGGGCGA CCTGGGCCGT
ATCGACCGCC AGCAGATGTT CCTGGGCGCG CTCGCTTCGC AGATGCTCGA CAGCAAGGTG
CTCGCCAACC CCACGACCAT GCACGCCCTG CTGGAGTCGG TGACCCAGTA CACGGCGACC
GACGCGGACC TCACCTTGGA CACGATGCTG TCGATCGCGT TCACCCTGGC CGACGTCGAA
CCGCGGAACA TCACCTTCTA CACGGTGCCG TCCTGGCCCG CCCCCTGGGA CCCGAACCGG
GTGATCTGGA ACGAGGAGAA AGCAGAACGG CTGTTCCGCG CGATCAAAGA GGACACCCCG
GTCGAGGACG TGATCGTGGA AACCGGGCGG CCAACGGCCG AGCCCAGCCC GTCGACCAGC
CTCACCCCGT CCTATCCTGC GGAGCCGTCC CCGAAGCCCA CGAACCCGGA ACCGACCCCG
TCCGCGGCGC CTCCGGACGC GATCGAAGGC CGCGACGCGA CCGCGGACCC CTGCGTCAAC
GGTCTGGGCC TGGGCACGGA GGACATGGTC ACCCCGCGCT AA
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| Protein sequence | MGNLIGSAFG HPLSPLVSFV PRPRARDSAE SHTPVEVSMS DDARPSTPSP EDPPPRRRSL
RRVLVWTSIL LSAALIACLG TAYAYYRSLR ANMVQHDLVA LLPEEERPPK IGDAVNILFI
GSDGREGGNA AYGGRDFVGE RSDSLLLAHI SPENRVIVVS FPRDSLVDLP ACDPYGETEG
TYGYYGMINA ALFHGGPPCV VKTIESLTQI RIDHFVHLSF VGFREMVDAL GGVEMCIPVP
LHDERSKLDI EAGTQVLDGE QALAFVRARY EIGDGGDLGR IDRQQMFLGA LASQMLDSKV
LANPTTMHAL LESVTQYTAT DADLTLDTML SIAFTLADVE PRNITFYTVP SWPAPWDPNR
VIWNEEKAER LFRAIKEDTP VEDVIVETGR PTAEPSPSTS LTPSYPAEPS PKPTNPEPTP
SAAPPDAIEG RDATADPCVN GLGLGTEDMV TPR
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