Gene Tfu_2953 details

Gene Information

• Locus tag: Tfu_2953
• ID: 3580352
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 3463623
• End bp: 3464330
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637686684
• Product: putative transcriptional regulator
• Protein accession: YP_291009
• Protein GI: 72163352
• COG category: [K] Transcription
• COG ID: [COG0819] Putative transcription activator

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCGTAC TTCCTGTCAC CGACGGCGAG ACAGGTTTCA CTGCCGAGCT GGGACGGCGG 
CACGCTGACC TTTTCGAAGC CTTCTACCAG CATCCGTTCC TCAAAGGCTT GCGGGAAGGC 
AGTCTCAGCC GGGAGCAGGT GCTGCACTAT GTCGCGCAGG ACTACCAGTA CTTGACCGCG 
TACACCCGCT GCTACGGGCT GGGGATGGCG CTCTCCCCCG ACCGGCGGTG GATGCGGTTC 
TTCCACGACA ACGCTGCCGT GATCCTCTGC GCGGAAACCC ACGCGCACGA GTCGCTGTGC 
GCGTACGTGG GGGTGTCCTA CGAGGAGGCG CAGGCGGACC ATCTGGCGCC CACTGCTCAG 
GCGTACATCA ACCACATGAT GGAGGCGGGC CGGGACACTC TCGGCGTGCT GCTGTCCGCT 
CTGCTGCCGT GCCCGTGGAC CTACCTGTGG GCGGCGGCCC GGTTCACCAG CGAAACCCCG 
CTGGACCCCA GCCACCCCTT CTACGGCTGG TGGGACTTTT ACGCGGGCCT GTACGAGTCC 
CAGAAGCTCA CCCAAACCCG GGCCATGCTG GACGAGTTGG CTGCCGCGGC GGGTCCCGCT 
GAGCGGGAGC GCATGGAGCG GGCATTCGTC GCGAGCTGCC ACTACGAGAT CCGGTTCTGG 
GAGATGGCCT GGTCTTTGGA GGACTGGACT CCGCCGAACG GCTCCTGA 

 

Protein sequence

MGVLPVTDGE TGFTAELGRR HADLFEAFYQ HPFLKGLREG SLSREQVLHY VAQDYQYLTA 
YTRCYGLGMA LSPDRRWMRF FHDNAAVILC AETHAHESLC AYVGVSYEEA QADHLAPTAQ 
AYINHMMEAG RDTLGVLLSA LLPCPWTYLW AAARFTSETP LDPSHPFYGW WDFYAGLYES 
QKLTQTRAML DELAAAAGPA ERERMERAFV ASCHYEIRFW EMAWSLEDWT PPNGS