Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2907 |
Symbol | |
ID | 3581585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3421963 |
End bp | 3422445 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637686636 |
Product | CarD family transcriptional regulator |
Protein accession | YP_290963 |
Protein GI | 72163306 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTCA AGGTCGGCGA CACTGTTGTC TACCCCCATC ATGGGGCTGC TCGAATCGAG GCTATCGAAA CACGGACCAT TAAGGGCGAG GAAAAGACTT ACCTCGTTCT GAAGGTCGAC AAAGGTGATC TTACGGTACG TGTTCCCGCG GACAATGCCG AGGAAGTCGG CGTCCGCGAC GTGGTTGGTC AAGAAGGTCT AGATCGGGTT TTCGAGGTGT TGCGCGCGCC GCACACCGAG GAGCCCACGA ACTGGTCTCG GCGCTACAAG GCAAACCTCG AAAAGCTGGC CTCCGGCGAC GTCAACAAGG TTGCAGAAGT CGTTCGGGAC CTCTGGCGGC GTGATAAGGA GCGCGGTCTT TCCGCCGGAG AAAAGCGCAT GCTCGCGAAA GCCCGACAGA TTCTGGTGAG TGAACTGGCG CTCGCCGAGA AGACGAATGA GGATAAAGCC GAGGCTCTTC TCGACGAGGT TCTCGCCGGT TAA
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Protein sequence | MTFKVGDTVV YPHHGAARIE AIETRTIKGE EKTYLVLKVD KGDLTVRVPA DNAEEVGVRD VVGQEGLDRV FEVLRAPHTE EPTNWSRRYK ANLEKLASGD VNKVAEVVRD LWRRDKERGL SAGEKRMLAK ARQILVSELA LAEKTNEDKA EALLDEVLAG
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