Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2862 |
Symbol | |
ID | 3581155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 3367245 |
End bp | 3368858 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637686590 |
Product | Na+/solute symporter |
Protein accession | YP_290918 |
Protein GI | 72163261 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGACA TGCACCTTGC GCACGTCCTC GACTCCGTCA ACCCCGCACT CAACTTCAGC GTCTTCGTCG CGTTCGTCCT GGTCACCCTG GTGATCGTGT TCCGGGCGAG CCGCAACTCC AAAACCGCGG CCGACTACTA CGCGGCCGGC CGGTCCTTCA GCGGCGCTCA AAACGGCCTC GCGATCGCCG GCGACTACCT GTCCGCCGCG TCCTTCCTCG GCATCTGCGG TGCCATCGCC GTCAACGGCT ACGACGGATT CCTGTACTCG ATCGGATTCC TCGTCGCCTG GCTCGTAGCG CTGCTGCTCG TCGCCGAACT GATGCGGAAC ACCGCCAAAT TCACCATGGG CGACGTGCTG GCCTTCCGCA TGCGGCAGCG GCCCATCCGC GCCGCCGCAG CCCTCTCCAC CCTGGCGGTG TCCTTCTTCT ACCTGCTGGC CCAAATGGCC GGAGCGGGCG GCCTCGTCAA CCTGCTGCTC GGTATCGAAG GTGAAGCCGC GCAGAACGCC ATCATCGCCA CCGTCGGCGT TGTAATGATC CTCTACGTGC TCATCGGCGG CATGCGCGGC ACCACCTGGG TCCAGATCAT CAAAGCCGCC CTGCTCATCG CCGGTGCCGG CGGCATGACC CTGTGGGTCC TCGGCATGTA CGGCTTCAAC TTCTCGGCCG TGCTCGCCGA CGCCGTGTCC ATGGAAGGCG GCAAGGGTGA AGCGCTGCTC GCCCCCGGCG CCCAGTACGG TATCAACGCG CTCACCAAGC TCGACTTCCT GTCGCTGGGA CTCGCGCTCG TGCTCGGCAC CGCCGGCCTG CCCCACGTGC TGATGCGGTT CTACACGGTC CCCACCGCCA AGGAAGCTCG CCGCTCGGTG GTGTGGGCCA TCGGCCTGAT CGGCCTGTTC TACCTGTTCA CCCTGGTGCT CGGCTACGCG GCCGGCGCCA TGGTGGGTGC TGAGGACATT TCCTCGGCCC CCGGCGGCGT GAACTCGGCG GCCCCGCTGC TCGCCCTGGC CCTGGGCGGC CCGGTCCTGC TCGGCTTCAT CGCCGCAGTC GCCTTCGCCA CCATCCTCGC TGTGGTCGCG GGCCTCACCA TCACCGCGTC GGCCTCGTTC GCCCACGACA TCTACTCCAA CGTGATCAAG AAGGGCAAGA CCGCCCCCGG CAGCGAGGTC CGCGTGGCCC GAATCACCTC CCTGGTGATC GGTGCGGTGG CCATCGTCGG CGGTATCTTC GCCAAGGAGC AGAACGTGGC GTTCCTCGTC GCGCTGGCCT TCGCTGTGGC CGCCTCGGCG AACCTGCCGA CGATCCTCTA CACGCTGTTC TGGAAGCGGT TCAACACCCA GGGCGCGCTG TGGAGCATCT ACGGCGGTCT GATCACCACG ATCACGCTGA TCGTGTTCTC CCCGGCCGTG TCCGGTTCGG AGAAAGCGAT GTTCCCGGAC TTGGACTTCG CGTTCTTCCC GCTGTCCAAC CCCGGCATCA TCTCCATTCC GCTGTCCTTC TTCCTCGGCT GGCTCGGCAC CATGCTCTCC AGCGAGCACG ACGCCAAGAA GCACGCCGAG ATGGAGGTCC GGTCCCTCAC CGGTGCCGGA GCGGAAAAAG CGGTCTCCCA CTGA
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Protein sequence | MTDMHLAHVL DSVNPALNFS VFVAFVLVTL VIVFRASRNS KTAADYYAAG RSFSGAQNGL AIAGDYLSAA SFLGICGAIA VNGYDGFLYS IGFLVAWLVA LLLVAELMRN TAKFTMGDVL AFRMRQRPIR AAAALSTLAV SFFYLLAQMA GAGGLVNLLL GIEGEAAQNA IIATVGVVMI LYVLIGGMRG TTWVQIIKAA LLIAGAGGMT LWVLGMYGFN FSAVLADAVS MEGGKGEALL APGAQYGINA LTKLDFLSLG LALVLGTAGL PHVLMRFYTV PTAKEARRSV VWAIGLIGLF YLFTLVLGYA AGAMVGAEDI SSAPGGVNSA APLLALALGG PVLLGFIAAV AFATILAVVA GLTITASASF AHDIYSNVIK KGKTAPGSEV RVARITSLVI GAVAIVGGIF AKEQNVAFLV ALAFAVAASA NLPTILYTLF WKRFNTQGAL WSIYGGLITT ITLIVFSPAV SGSEKAMFPD LDFAFFPLSN PGIISIPLSF FLGWLGTMLS SEHDAKKHAE MEVRSLTGAG AEKAVSH
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