Gene Tfu_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2816 
Symbol 
ID3580954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp3308031 
End bp3308699 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content70% 
IMG OID637686541 
Producthypothetical protein 
Protein accessionYP_290872 
Protein GI72163215 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0366008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAACGG AACGCGCAAC ACGCATCCTG GACGCGGCAG CTGAACTGAT CGCCCGCTAC 
GGCTACGCCA AAACCAGCGT CAGCGACATC GCGCAGCGGG CAGGAATCGC GAAAGGCGCC 
ATATACCAGG AGTTCCCCAG CAAAGAAGCG GTCGTTGCCG CGCTCGTGGA ACGCCAAGTC 
CACCAGTTGA CCGCAACCGT CGCCCGCGCC GTGCGCGACG ACCCTGACGG GGCGCGGCTT 
TCCGTGATCT ACCGGCACGC GCTCCGCGCC CTCGCCGCGG ACCCGCTGAT GCGCGCGTTC 
TACACCGCCG ACAGCCAGAT CCTCGGCGAC ATCGTGCGGC GGCGCGGCCC CGAACGCTAC 
GGCCCCCGCC AGCGCCTGGT CGTGGACTTC GTCTCCCGGA TGCAAGACGC CGGACTCATC 
CGAGCCGACC TGGACGCGGC CGCAGTCGCC CACGTGCTCG GCATCATCTC CCTCGGCCTC 
ATCACCATCG AATCGACGGT CGGCTCCGCT GTCTCCCCGC CCCTCGAGAA AACCCTGGAC 
GCGCTCAGCA CCCTCCTCGC GGAAGGGTTC GAAGCCGGAC CTGACGCCGA CCGCGCCGCC 
GGGCAGCGCG CCTTCGACAC CTTCCTCGCC GACCTGGCCG CCACCGCACG TCCGGGCACC 
CCGCAGTGA
 
Protein sequence
MGTERATRIL DAAAELIARY GYAKTSVSDI AQRAGIAKGA IYQEFPSKEA VVAALVERQV 
HQLTATVARA VRDDPDGARL SVIYRHALRA LAADPLMRAF YTADSQILGD IVRRRGPERY 
GPRQRLVVDF VSRMQDAGLI RADLDAAAVA HVLGIISLGL ITIESTVGSA VSPPLEKTLD 
ALSTLLAEGF EAGPDADRAA GQRAFDTFLA DLAATARPGT PQ