| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2762 |
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| Symbol | |
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| ID | 3579240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 3240358 |
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| End bp | 3242580 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637686485 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_290818 |
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| Protein GI | 72163161 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGA ACATCCCGAA CTTTGCGGAG ATCGCTGCGG GCACCCCCGC GGCGGCCTCC
AGTCCGGAAC AGGCCGAGCG GTGGCGTCAG GCGCTCGTGG AAGCCACCGG GAAGAACCCG
GACGCACTGG TGTGGGAGAC CCCTGAAGGG ATCAGCGTCA AACCGCTGTA CACCCAGGCT
GACCGGGAAG GCTTGGACTT CCTCCGCACC TATCCAGGGT TGGCGCCGTT CCTGCGCGGC
CCCTACCCGA CCATGTACAC CACGCAGCCG TGGACGATCC GGCAGTACGC GGGCTTCTCC
ACGGCGGAGG AGTCCAACGC GTTCTACCGC CGCAACCTGG CGGCCGGCCA GAAAGGGCTG
TCGGTCGCGT TCGACCTGGC CACCCACCGC GGCTACGACT CCGACCACCC GCGGGTGGCG
GGCGACGTGG GCATGGCCGG GGTGGCGATC GACTCCATCT ACGACATGCG GCAGCTCTTC
GACGGCATCC CGCTGGACCG CATGAGCGTG TCCATGACCA TGAACGGCGC AGTGCTCCCC
GTGATGGCCC TCTACATCGT GGCCGCGGAG GAGCAGGGGG TGGCGCCCGA ACAGTTGGCG
GGGACCATCC AGAACGACAT CCTCAAAGAG TTCATGGTCC GCAACACCTA CATCTACCCG
CCGCAGCCGT CGATGCGGAT CATCTCCGAC ATCTTCGCCT ACACCTCCAA GCGGATGCCG
CGGTTCAACT CCATTTCGAT CTCTGGCTAC CACATGCAGG AGGCCGGGGC TACCGCGGAC
CTCGAGCTGG CGTACACGCT GGCGGACGGG ATCGAATACA TCCGCGCCGG GCTCAACGCC
GGGCTGGAGG TGGACGCTTT CGCGCCCCGC CTGTCGTTCT TCTGGGCGAT CGGCATGAAC
TTCTTCATGG AGGTCGCCAA ACTGCGTGCC GCGCGGCTGC TCTGGGCGAA GCTGGTCAAA
CAGTTCTCGC CGAAGAACCC CAAGTCGCTG AGCCTGCGCA CCCACTCGCA GACCTCCGGC
TGGTCGCTGA CCGCCCAGGA CGTGTTCAAC AACGTGGTGC GCACCTGCGT GGAGGCGATG
GCCGCCACCC AGGGCCACAC CCAGTCCCTG CACACCAATG CGCTGGACGA AGCCCTGGCA
CTGCCCACCG ACTTCTCCGC GCGGATCGCC CGCAACACCC AACTGGTGCT GCAGCAGGAG
TCCGGCACCA CCCGGGTGAT CGACCCGTGG GGCGGCAGCG CGTTCGTGGA GCGGCTCACC
TTCGAGCTCG CGGCCCGCGC CTGGGGACAC ATCCAAGAGA TCGAAGAAGC CGGGGGCATG
GCGAAAGCCA TCGACGCGGG CATCCCCAAG ATGCGGATTG AAGAAGCCGC GGCCCGCACC
CAAGCGCGGA TCGACTCCGG ACTGCAGCCG GTCATCGGGG TCAACAAGTA CCGGCCGGAG
ACCATGGACG AAATCGAGGT CCTCAAGGTC GACAACAGCC GGGTGCGCGC CGAGCAGATC
GAGAAGCTGC GGCGGCTCCG CGAGGAGCGC GACGAGGACG CGGTGCAGGA GGCGCTGCGG
CGGCTCACCG CAGCGGCGGC CGCCGAGTCG AACGGTGCGA CACTGGAGAA CAATCTGCTC
GCCCACGCGG TGGATGCGGC CCGGGCTATG GCCACGGTCG GGGAGATCTC CGAAGCGATC
GAGAAAGTGT ACGGACGGCA CTCCGGGCAG ATCCGCACCA TCCAGGGCGT GTACCGGGAA
GAGGCGCACA ACGCGGAGGC GGCACGACAA GCCATGGACG AGGTTGCCGC GAAGGTCGCG
GAGTTCGAAG AAGCAGAGGG ACGCCGGCCG CGGATCCTCG TCGCCAAGAT GGGCCAGGAC
GGCCACGACC GCGGGCAGAA GGTGATCGCC ACCGCTTTCG CAGACCTCGG TTTCGACGTG
GACGTGGGCC CGCTGTTCCA GACGCCCGCT GAGGTCGCCG CGCAGGCGGT CGAAGCCGAC
GTGCACATCG TCGGTGTGTC GTCGCTGGCC GCGGGGCACC TCACGCTGGT GCCTGCGCTC
CGCGACGAAC TCGCCGCCCT GGGGCGCTCC GACATCATGA TCGTGGTCGG CGGGGTGATT
CCGCCGTCCG ACTTCGACGC CCTGTACGAG GCGGGTGCCG CGGCGATCTT CCCGCCGGGC
ACGGTGATCG CCGAGGCTGC GCTAGGGCTC CTCGACCAGC TTCGGGAGCG GCTGGGACAC
TGA
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| Protein sequence | MSANIPNFAE IAAGTPAAAS SPEQAERWRQ ALVEATGKNP DALVWETPEG ISVKPLYTQA
DREGLDFLRT YPGLAPFLRG PYPTMYTTQP WTIRQYAGFS TAEESNAFYR RNLAAGQKGL
SVAFDLATHR GYDSDHPRVA GDVGMAGVAI DSIYDMRQLF DGIPLDRMSV SMTMNGAVLP
VMALYIVAAE EQGVAPEQLA GTIQNDILKE FMVRNTYIYP PQPSMRIISD IFAYTSKRMP
RFNSISISGY HMQEAGATAD LELAYTLADG IEYIRAGLNA GLEVDAFAPR LSFFWAIGMN
FFMEVAKLRA ARLLWAKLVK QFSPKNPKSL SLRTHSQTSG WSLTAQDVFN NVVRTCVEAM
AATQGHTQSL HTNALDEALA LPTDFSARIA RNTQLVLQQE SGTTRVIDPW GGSAFVERLT
FELAARAWGH IQEIEEAGGM AKAIDAGIPK MRIEEAAART QARIDSGLQP VIGVNKYRPE
TMDEIEVLKV DNSRVRAEQI EKLRRLREER DEDAVQEALR RLTAAAAAES NGATLENNLL
AHAVDAARAM ATVGEISEAI EKVYGRHSGQ IRTIQGVYRE EAHNAEAARQ AMDEVAAKVA
EFEEAEGRRP RILVAKMGQD GHDRGQKVIA TAFADLGFDV DVGPLFQTPA EVAAQAVEAD
VHIVGVSSLA AGHLTLVPAL RDELAALGRS DIMIVVGGVI PPSDFDALYE AGAAAIFPPG
TVIAEAALGL LDQLRERLGH
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