| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2640 |
|---|
| Symbol | rpsC |
|---|
| ID | 3581456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3104538 |
|---|
| End bp | 3105350 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637686359 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_290696 |
|---|
| Protein GI | 72163039 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.659159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGACAGA AAGTCAACCC GCACGGGTTC CGCCTCGGAG TGACCACCGA CTTCAAGAGC
CGGTGGTTTG CCGACAAGCT GTACAAGGAC TACGTCAAGG AAGACGTAGC CATCCGCCAG
ATGCTGACTC GCGGCATGGA GCGCGCCGGG ATCTCCAAGG TGGAGATCGA GCGCACCCGT
GAGCGGGTCC GGGTCGACGT CCACACCGCC CGGCCGGGCA TCGTCATCGG CCGCCGCGGT
GCGGAGGCCG ACCGCATCCG TGCCAACCTC GAGAAGCTGA CCAACAAGCA GGTCCAGCTC
AACATCCTCG AGGTGAAGAA CCCTGAGATC GACGCCCAGC TCGTCGCTCA AGGGGTGGCG
GAGCAGCTGT CGAGCCGAGT CGCGTTCCGC CGTGCCATGC GCAAGGCCAT TCAGAGCGCG
ATGAAGAGCG GGGCCAAGGG CATCCGTGTC CAGTGCAGTG GCCGTCTCGG CGGCGCCGAG
ATGTCGCGTT CCGAGTTCTA CCGCGAAGGC CGGGTGCCGC TGCACACGCT GCGCGCCGAC
ATTGACTACG GCTTCTTTGA GGCGCGTACC ACCTTCGGCC GTATCGGCGT GAAGGTCTGG
ATCTACAAGG GCGAAGCGCC GATGACCCGC GCTGAGCGCG AGGCCGCCCA GGCCGCGCAG
CGTGCTGCTG GTCCGCAGCG CCGGGAGCGT CCGGGACGCC GTCGTCGTGG CGGCGGCGGA
GGCGGCGGCC AGCAGCAACA GCAGGCTGAG AAGGCGACCG CCCAGGCGAC CGAGGCCGCT
AAGGCCGCGA AGTCCGGGAA CGAGGGGAGC TGA
|
|---|
| Protein sequence | MGQKVNPHGF RLGVTTDFKS RWFADKLYKD YVKEDVAIRQ MLTRGMERAG ISKVEIERTR
ERVRVDVHTA RPGIVIGRRG AEADRIRANL EKLTNKQVQL NILEVKNPEI DAQLVAQGVA
EQLSSRVAFR RAMRKAIQSA MKSGAKGIRV QCSGRLGGAE MSRSEFYREG RVPLHTLRAD
IDYGFFEART TFGRIGVKVW IYKGEAPMTR AEREAAQAAQ RAAGPQRRER PGRRRRGGGG
GGGQQQQQAE KATAQATEAA KAAKSGNEGS
|
|---|
| |