Gene Tfu_2629 details

Gene Information

• Locus tag: Tfu_2629
• Symbol: rpsE
• ID: 3580643
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 3099790
• End bp: 3100392
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637686348
• Product: 30S ribosomal protein S5
• Protein accession: YP_290685
• Protein GI: 72163028
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.192925
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGCAG CTCCGCGGCG CGGCGCCGGT GGCGAGCGGC GTTCCGGCCG TGACGATCGC 
CGCGGCGGTT CCGCTGACAA GGGCGTCTCC TACATCGAGC GGGTTGTGAA GATCAACCGG 
GTCGCCAAGG TCGTCAAGGG TGGACGCCGG TTCAGCTTCA CCGCTCTGGT CGTGGTCGGC 
GACGGCAACG GCATGGTCGG CGTCGGCTAC GGCAAGGCGA AGGAAGTGCC CGCGGCGATC 
GCCAAGGGTG TTGAGGAAGC GAAGAAGAAC TTTTTCCGGG TCCCGCGGAT CGGGGGCACC 
ATCGTGCACC AGGTCCAGGG AGAGGACGCT GCCGGCGTGG TCCTGCTCCG CCCGGCCGCT 
CCCGGTACCG GTGTGATCGC CGGTGGTCCG GTGCGTGCCG TGCTGGAGTG CGCTGGCATC 
CACGACGTCC TCACCAAGTC GCTCGGGTCG TCGAACCCGA TCAACATTGT GCGCGCGACG 
GTTGCTGCTC TGAAGAGCCT GAGCCGTCCC GAAGAGATCG CCGCCCGGCG TGGCCTGCCG 
CTGGAAGATG TCGTTCCGGC GCCCATGCTG CGCGCTCGCG CGGAAGCCAA GGCGGGGGTG 
TAG 

 

Protein sequence

MAAAPRRGAG GERRSGRDDR RGGSADKGVS YIERVVKINR VAKVVKGGRR FSFTALVVVG 
DGNGMVGVGY GKAKEVPAAI AKGVEEAKKN FFRVPRIGGT IVHQVQGEDA AGVVLLRPAA 
PGTGVIAGGP VRAVLECAGI HDVLTKSLGS SNPINIVRAT VAALKSLSRP EEIAARRGLP 
LEDVVPAPML RARAEAKAGV