Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2626 |
Symbol | secY |
ID | 3580640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 3097534 |
End bp | 3098862 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637686345 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_290682 |
Protein GI | 72163025 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.512513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTAGGTG CGTTCGTCCG TGCGTTTCGC ACGCCTGAAC TACGTAACAA ACTGCTGTTC ACGCTGTTTA TCCTGACGAT TTTCAGGCTC GGCGCCGTCA TCCCCGCCCC GGGGATCGAC AGTGTCGCTA TTGAGAAGTG TGTCCAGCAG ACGGCCGAGA CCGGTGCCTC GAATATCTAT GCGCTGATCA ACTTGTTCAG CGGTGGCGCG CTGCTGCAAC TCGCCGTCTT CGCGCTGGGC ATCATGCCGT ACATCACCGC GAGCATTATC CTCAACCTGC TCACGGTGGT GGTGCCGCGG CTTGAAGCAC TGAAGAAGGA AGGCCAGGCC GGGCAGAGCA AGATCACACA ATACACCCGT TACCTGACGA TCGCTCTGGC CGTCCTCCAG TCCACCAGTG TCATCGCGAT GGCCCGGACC GGGCAGCTCT TCCAGAACGC CTGTATACCC GAAGAGTACA TGCCCTTCCT CCACACCTCT TACGAGCTGC CGGTCCTGAT CATGATCGTG TTCGTGATGA CTGCGGGCAC CTGCGTCATC ATGTGGTTCG GTGAGCTGAT CACCGAGCGC GGGGTCGGCA ACGGCATGTC GCTGCTGATC TTCACCCAGA TCATCGCGGA GTTCCCCGCC GGCATGATGC GCATCTGGAG CGAGAACCCC GCGTGGGTCT TCGCCCTCGT CTGCGTGGCC GGAGTGGTGC TTATCACAGG TGTGGTCTTC ATCGAGCAGG CCCAGCGCCG TATCCCCGTG CAGTACGCCA AGCGCATGGT GGGCCGCCGG ATGTACGGTG GCAGCTCGAC CTACATCCCG CTGAAGGTGA ACCAGGCCGG TGTGATTCCG GTCATCTTCG CCTCGTCCCT GCTGTACCTG CCGACCCTGG TGGTCGGACT GCTGGGCGCC GAAACCGACA ACAAGGTGGT GGACTTCCTC AACACCTACT TCAACCCGAT GGGGAACCAC CCGGTTTACC TGACCACCTT CTTCCTCCTC ATTGTCGGCT TCGCCTTCTT CTACGTGGCC ATTACTTTCA ACCCCGCTGA AGTGGCCGAC AACATGAAGA AGTACGGTGG ATTCATCCCG AGTATTCGCC CGGGACGTCC GACCGCCGAG TACCTGGACT ACGTCCTTAC CCGGCTGACG ACGCCTGGTG CGCTGTACCT GGGTGTGATC GCGCTGTTGC CGATGGTGGC TCTGGGGACT TCCGGGGCTG CCGCGAACTT CCCGTTCGGC GGCGTCAGCA TCCTGATCAT GGTTGGTGTC GGGCTGGACA CGGTGAAGCA GATCGAGAGT CACCTCCAGC AGAGGAACTA CGAGGGTTTT CTGCGATAG
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Protein sequence | MLGAFVRAFR TPELRNKLLF TLFILTIFRL GAVIPAPGID SVAIEKCVQQ TAETGASNIY ALINLFSGGA LLQLAVFALG IMPYITASII LNLLTVVVPR LEALKKEGQA GQSKITQYTR YLTIALAVLQ STSVIAMART GQLFQNACIP EEYMPFLHTS YELPVLIMIV FVMTAGTCVI MWFGELITER GVGNGMSLLI FTQIIAEFPA GMMRIWSENP AWVFALVCVA GVVLITGVVF IEQAQRRIPV QYAKRMVGRR MYGGSSTYIP LKVNQAGVIP VIFASSLLYL PTLVVGLLGA ETDNKVVDFL NTYFNPMGNH PVYLTTFFLL IVGFAFFYVA ITFNPAEVAD NMKKYGGFIP SIRPGRPTAE YLDYVLTRLT TPGALYLGVI ALLPMVALGT SGAAANFPFG GVSILIMVGV GLDTVKQIES HLQQRNYEGF LR
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