Gene Tfu_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2618 
Symbol 
ID3580632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp3092701 
End bp3093717 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content65% 
IMG OID637686337 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_290674 
Protein GI72163017 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCG CTCAGCGTCC CACCCTGACC GAAGAGCCGA TCTCCGAGTT CCGCTCCAAG 
TTCATCCTTG AACCCCTGGA GCCGGGCTTC GGCTACACCA TCGGGAACTC GCTGCGCCGC
ACCCTGCTGT CGTCGATTCC CGGTGCTGCC GTGACCAGCA TCCGCATCGA GGGTGTTGAG
CACGAGTTCA CCACCGTGCC CGGCGTCAAG GAGGACGTTA CCGAGATCAT CCTGAACCTC
AAGGGTCTCG TGGTGAGCTC GGAGCACGAC GAGCCGGTAC TGATGTACCT GCGCAAGCAG
GGACCGGGAG TGGTCACCGC CGCCGATATC GCTCCGCCTG CCGGGGTCGA GGTGCACAAC
CCGGAGATGC ACATCGCGAC CCTGAACAGC AAGGGCAAGC TGGAGATGGA GATGACGGTC
GAACGGGGCC GTGGCTACGT CTCCGCCGCC CAGAACAAGC AGCCGGGGCA GGAGATCGGC
CGGATTCCGA TTGACTCCAT CTACTCTCCC GTCATGCGGG TCACCTACAA GGTCGAGGCG
ACCCGTGTCG AGCAGCGCAC CGACTTCGAC CGCCTCATCC TGGACGTCTG GACCAAGCCG
GCCATCCGGC CTCGCGACGC GGTGGCCAGC GCGGGCAAGA CCCTGGTGGA GCTGTTCGGG
TTGGCGCGGG AGCTCAACGT CGACGCCGAA GGCATCGACA TGGGTCCCTC TCCCACGGAC
GCTGCGCTGG CCGCGGATCT GGCACTGCCG ATCGAGGACC TCAACCTCAC GGTCCGCTCC
TACAACTGCC TCAAGCGCGA GGGTATCCAC ACGGTCGGCG AGCTCGTCGC TCGCACCGAG
CAGGACCTGC TGGACATCCG GAACTTCGGT GCGAAGTCAA TAGAGGAAGT CAAGCAGAAG
CTGAGCGACA TGGGGCTCGC GCTGAAGGAC GCCCAGGGCG GGTTCGACCC GGGGAGCGCG
GCCGGTTCGT ACGGTTCCGA CCACGACCAG TCCTACGTCG AGACTGAGCA GTACTAG
 
Protein sequence
MLIAQRPTLT EEPISEFRSK FILEPLEPGF GYTIGNSLRR TLLSSIPGAA VTSIRIEGVE 
HEFTTVPGVK EDVTEIILNL KGLVVSSEHD EPVLMYLRKQ GPGVVTAADI APPAGVEVHN
PEMHIATLNS KGKLEMEMTV ERGRGYVSAA QNKQPGQEIG RIPIDSIYSP VMRVTYKVEA
TRVEQRTDFD RLILDVWTKP AIRPRDAVAS AGKTLVELFG LARELNVDAE GIDMGPSPTD
AALAADLALP IEDLNLTVRS YNCLKREGIH TVGELVARTE QDLLDIRNFG AKSIEEVKQK
LSDMGLALKD AQGGFDPGSA AGSYGSDHDQ SYVETEQY