| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2593 |
|---|
| Symbol | |
|---|
| ID | 3581065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 3060800 |
|---|
| End bp | 3062617 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637686312 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_290649 |
|---|
| Protein GI | 72162992 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACC GCACGCGGCT TCCCGCGAGA GGAGGGAAGC GGCGTCCTCT GCCTCCGCCC
GGCGCCCGGA AAGGAGGAGG GGACCCCGCG CACCAGATGA CGGCAGCACG GTTGGGACCA
CAGGAACGGG ACGCCGCCCT CAGGGCCATG GCCGACACCG AACTCGACGT GCTGGTGGTC
GGAGGAGGGA TCGTCGGAGC GGGTGTCGCT CTGGACGCGG TGGCGCGCGG CCTCTCCGTC
GGGCTCGTGG AGGCCCGCGA CTTCGCTTCA GGAACCTCCA GCAGGTCCAG CAAGCTCATC
CACGGGGGCC TGCGCTACCT GGAGCACTTG GACTTCCCTC TCGTCCGCGA GGCGCTCACC
GAACGCGGCC TGCTCCTCAG CCGGATCGCC CCGCACCTGG TGCGCCCGGT GCCGTTCCTG
TTCCCGCTCC GCTCCCACTG GGAACGCCCC TACATCGGGG CGGGGGTGGC CCTCTACGAC
GCGCTGGCCC TGTCCGGCAC CCGCACCCGC GGCCTGCCCG GCCACCGCCA CCTCAGCCGC
CGTGCCGCCC TGCGGATCTT CCCCGCGCTG CGCCGCGACG CCCTCGTCGG CGCCGTGCAG
TACTGGGACG CACAGGTGGA CGACTCCCGC TACGTGGTGA TGGTGCTCCG CACCGCCGCC
ACCTACGGCG CGCACATCGC CTCGCGTACC CAGGCCGTCG GGTTCCTGCG GGAAGGGGAG
CATGTCACCG GGGCCCGCGT CGTCGACCTG GAAACCGGCC GAGAGTTCGC GGTCCGCGCG
AAACAGGTGG TCAACGCGGC CGGGGTGTGG ACCGACGAGA TCCAGGAGAT GGTGGGCGGG
CGCGGCCAGA TCCACGTGCG CGCCTCCAAA GGCGTTCACC TGGTGGTGCC TCGGGACCGG
ATCCACGCAT CCTCCGGGCT GATCCTGCGC ACCGAGAAGA GCGTGCTGTT CGTCATCCCG
TGGGGACGGC ACTGGATCCT CGGCACCACC GACACCGCAT GGGACCTGGA CAAGGCGCAC
CCCGCGGCCA GCCGAACCGA CATCGACTAC GTGCTCAACC GCGTCAACGC AGTCCTGAAA
ACCCCGTTGA CCAGAGACGA CGTGGAGGGG GTGTATGCGG GGCTGCGGCC GCTGCTCGCG
GGGGAGTCCG AGGAGACCTC CCGGTTGTCC CGGGAGCACA CCGTGGCGCA CCCGGTGCCC
GGCCTAGTCC TCATCGCGGG CGGAAAGTAC ACCACCTACC GGGTCATGGC CAAGGACGCG
GTGGACGCGG TCGCCCACGG GATGGGCGGG GGAGTGCCCC CGTCGGTGAC CGACCGGCTT
CCCCTGGTGG GCGCCGACGG CTATTTCGCG CTGTGGAACC AGCGTCGCAT CCTCGCCCGC
CGCACCGGCC TGCACGTGTC CCGGATCCAG CACCTTCTGC GCCGCTACGG TTCCCTCATC
CACGAAGTGC TGGGACTGAT CGCCGAACAG CCGGATTTGA AGCAGCCGTT GACCGGCGCC
GACGACTACC TGCGTGCCGA AGTGGTCTAC GCGGTCCGCT ACGAAGGGGC CCGCCACCTC
GACGACGTGC TCAGCCGCCG CACCCACATC GCCATTGAGA CGTGGGACCG CGGCCTTGCC
GCGGCTGAGG AGGCGGCACA GCTCATGGCC GGCCCGCTCG GCTGGGACGA TGCCCAAATC
GCCCGAGAAG TGGAGTACTA CCGTGCCCGG ATCGAAGCGG AACGGGCCGC CCAGGAGCAA
GACAGCGACC AGGAAGCCGA CGCGGTCCAG CACGGTGCCC CGGATATCGT GCCGCAAGCC
ACCACCGTAC GGGTCTGA
|
|---|
| Protein sequence | MPHRTRLPAR GGKRRPLPPP GARKGGGDPA HQMTAARLGP QERDAALRAM ADTELDVLVV
GGGIVGAGVA LDAVARGLSV GLVEARDFAS GTSSRSSKLI HGGLRYLEHL DFPLVREALT
ERGLLLSRIA PHLVRPVPFL FPLRSHWERP YIGAGVALYD ALALSGTRTR GLPGHRHLSR
RAALRIFPAL RRDALVGAVQ YWDAQVDDSR YVVMVLRTAA TYGAHIASRT QAVGFLREGE
HVTGARVVDL ETGREFAVRA KQVVNAAGVW TDEIQEMVGG RGQIHVRASK GVHLVVPRDR
IHASSGLILR TEKSVLFVIP WGRHWILGTT DTAWDLDKAH PAASRTDIDY VLNRVNAVLK
TPLTRDDVEG VYAGLRPLLA GESEETSRLS REHTVAHPVP GLVLIAGGKY TTYRVMAKDA
VDAVAHGMGG GVPPSVTDRL PLVGADGYFA LWNQRRILAR RTGLHVSRIQ HLLRRYGSLI
HEVLGLIAEQ PDLKQPLTGA DDYLRAEVVY AVRYEGARHL DDVLSRRTHI AIETWDRGLA
AAEEAAQLMA GPLGWDDAQI AREVEYYRAR IEAERAAQEQ DSDQEADAVQ HGAPDIVPQA
TTVRV
|
|---|
| |