| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2555 |
|---|
| Symbol | |
|---|
| ID | 3580117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 3011359 |
|---|
| End bp | 3012963 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637686271 |
|---|
| Product | propionyl-CoA carboxylase complex B subunit |
|---|
| Protein accession | YP_290611 |
|---|
| Protein GI | 72162954 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.117382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACCC AAGCCCCTGA ACCGCTGCCC GCGGACCAGA TCGACATTCG CACCACCGCG
GGCAAACTCG CAGACCTGCA GCGACGCCGC TACGAGGCGG TCCACGCAGG CTCCGAACGA
GCCGTAGCAA AACAGCACGC CAAGGGCAAG ATGACCGCCC GCGAGCGCAT CGACGCCCTG
CTCGACCCGG GCTCCTTCGT GGAGTTCGAC GCCTTCGCGC GTCACCGGTC CACCAACTTC
GGCTTGGAGA AGAACCGCCC CTACGGCGAC GGCGTCGTCA CCGGCTACGG CACCATCGAC
GGCCGACCGG TCGCCGTGTT CAGCCAGGAC GTCACCGTCT TCGGCGGTTC CCTCGGCGAG
GTCTACGGCG AGAAGATCGT CAAAGTCCTC GACCATGCGC TCAAAACCGG CTGCCCGGTC
ATCGGCATCA ACGAAGGCGG CGGCGCGCGC ATCCAAGAGG GCGTGGTGGC GCTGGGCCTC
TACGCCGAGA TTTTCAAACG CAACACCCAC GCCTCCGGGG TCATCCCCCA GATCTCGCTC
GTCATGGGGG CAGCAGCAGG CGGCCACGTC TACTCGCCCG CCCTCACCGA CTTCATCGTC
ATGGTCGACC AGACCTCCCA GATGTTCATC ACCGGGCCCG ACGTCATCAA GACGGTCACC
GGTGAAGACG TCACCATGGA GGAGCTGGGC GGCGCACGCA CCCACAACAC CAAGTCGGGC
GTGGCCCACT ACATGGCCTC CGACGAGCAC GACGCCCTGG AGTACGTCAA GGCGCTGCTG
TCCTACCTGC CCTCCAACAA CCTGGACGAG CCGCCCGTCG AACCCGTCCA GGTGACCCTG
GAGGTGACCG AGGAAGACCG GGAGCTGGAC ACCTTCATCC CCGACTCGGC CAACCAGCCC
TACGACATGC GCCGCGTCAT CGAACACATC GTGGACGACG GGGAGTTCCT GGAAGTCCAC
GAACTGTTCG CGCAGAACAT CATCGTGGGC TTCGGCCGGG TCGAAGGCCA CCCGGTAGGT
GTCGTCGCCA ACCAGCCGAT GAACCTCGCG GGCTGCCTGG ACATCGACGC CTCCGAGAAA
GCCGCCCGGT TCGTCCGCAC CTGCGACGCC TTCAACATCC CCGTGCTGAC CCTGGTCGAC
GTCCCCGGCT TCCTGCCCGG AACCGACCAG GAGTTCGGCG GCATCATCCG GCGCGGCGCC
AAACTGCTCT ACGCCTACGC TGAGGCGACC GTCCCCCTGG TGACCATCAT CACCCGCAAA
GCGTTCGGCG GCGCCTACGA CGTCATGGGC TCCAAGCACC TGGGTGCAGA CATCAACCTG
GCGTGGCCGA CCGCGCAGAT CGCGGTCATG GGAGCCCAGG GTGCCGTCAA CATCCTGCAC
CGGCGTACCC TCGCCGCCGC CGACGACGTC GAAGCGACCC GCGCCCAGCT CATCGCCGAA
TACGAAGACA CTCTGCTCAA CCCGTACAGC GCGGCCGAAC GGGGCTACGT CGACAGCGTC
ATCATGCCGT CGGAAACCCG CACGTCCGTC ATCAAAGCCC TGCGTGCGCT GCGCGGCAAA
CGCAAGCAGC TCCCGCCCAA GAAGCACGGG AATATCCCAC TCTGA
|
|---|
| Protein sequence | MATQAPEPLP ADQIDIRTTA GKLADLQRRR YEAVHAGSER AVAKQHAKGK MTARERIDAL
LDPGSFVEFD AFARHRSTNF GLEKNRPYGD GVVTGYGTID GRPVAVFSQD VTVFGGSLGE
VYGEKIVKVL DHALKTGCPV IGINEGGGAR IQEGVVALGL YAEIFKRNTH ASGVIPQISL
VMGAAAGGHV YSPALTDFIV MVDQTSQMFI TGPDVIKTVT GEDVTMEELG GARTHNTKSG
VAHYMASDEH DALEYVKALL SYLPSNNLDE PPVEPVQVTL EVTEEDRELD TFIPDSANQP
YDMRRVIEHI VDDGEFLEVH ELFAQNIIVG FGRVEGHPVG VVANQPMNLA GCLDIDASEK
AARFVRTCDA FNIPVLTLVD VPGFLPGTDQ EFGGIIRRGA KLLYAYAEAT VPLVTIITRK
AFGGAYDVMG SKHLGADINL AWPTAQIAVM GAQGAVNILH RRTLAAADDV EATRAQLIAE
YEDTLLNPYS AAERGYVDSV IMPSETRTSV IKALRALRGK RKQLPPKKHG NIPL
|
|---|
| |