| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2383 |
|---|
| Symbol | |
|---|
| ID | 3581137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2806470 |
|---|
| End bp | 2807258 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637686098 |
|---|
| Product | peptidase C60, sortase A and B |
|---|
| Protein accession | YP_290439 |
|---|
| Protein GI | 72162782 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
|---|
| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.480623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTCCA CTTCCCGACG CCCCCCTAGT GACCGGCGCC GCCGTTCCGG CAGGGGTCGG
AGGAGAGCTC CCGCTCCGCG CAGCCGCGTC ACTATCGGCG ATGTTGTGCG CGTCATCTTC
CGCACCATCG GTGAACTCCT GTTCACGGCA GGCCTGATCA TGCTGTTCTT CGCGGCCTTC
CAGATCTGGG GCAAGCAGTT CCAGACCGAT GCCGAGCAGG AGCGGCTGGA GCAGGCCATC
GCCGAGGTGT GGGAGCAGGG GCCCGACTCT GAACCGCTGC CCGGATCAGC CAACAGCCGG
CTCTACATCC CTAAGACCGA CCAGAACTGG GTCGTGGTCA GCGGGGTCGG CCCGGAAGAC
ATCAAGTACG GTCCGGGCTG GTATCCCGAA TCCTGGACCC CGGAGGGAAT GGTGCCCGCG
GCCCGTGCCG GACAGCCCGG CAACTACGCG GTCGCCGGGC ACCGGGTCGC CGCGGTCTTC
TGGGACCTCG ACAAGTTGGA GGAAGGCGAC GAACTGGTCC TGGAGGACGC CGAGAACTTC
TACACCTACC AGGTAGTGGA GAGCAAGGTT GTGCTGCCCA ACGCGATCGA GGTGATCGCT
CCAGACCCGT TCAACCCGGA GTCCACGGAG GAACCCGAGA AGGCCTATCT CACCCTCACC
ACCTGCCACC CCAAGCTGCA GAACTCGCAT CGGCTGATCG TCCACGCCGA ACTCGTTGAC
ACCCGCCCCA AGGAACGGGG CATGCCCGAC AACATCGCGC ACATGGCGCC TGAGAACGAG
GAGGGGTGA
|
|---|
| Protein sequence | MVSTSRRPPS DRRRRSGRGR RRAPAPRSRV TIGDVVRVIF RTIGELLFTA GLIMLFFAAF
QIWGKQFQTD AEQERLEQAI AEVWEQGPDS EPLPGSANSR LYIPKTDQNW VVVSGVGPED
IKYGPGWYPE SWTPEGMVPA ARAGQPGNYA VAGHRVAAVF WDLDKLEEGD ELVLEDAENF
YTYQVVESKV VLPNAIEVIA PDPFNPESTE EPEKAYLTLT TCHPKLQNSH RLIVHAELVD
TRPKERGMPD NIAHMAPENE EG
|
|---|
| |