| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2373 |
|---|
| Symbol | |
|---|
| ID | 3581127 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | + |
|---|
| Start bp | 2793991 |
|---|
| End bp | 2795307 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637686088 |
|---|
| Product | nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_290429 |
|---|
| Protein GI | 72162772 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01513] putative nicotinate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC GCTGGAGCAG TGCGCTTCTC ACCGACCACT ACGAACTGAC CATGGTGCAG
GCCGCGCTGC ACAGCGGCGC AGCGCACCGG CGGTGTGTTT TCGAAATGTT CGCGCGTCGA
CTACCGGAAA CGCGCCGTTA CGGTGTGGTC GCGGGGACCG GACGGTTCCT CGATGCGCTC
GAACACTTCC GTTTCACCCC CGAGGTCTTG GAGTTCCTCG AGCGGAACGG GATCGTCAAC
AGCTCTACCC TGTCGTTCCT CGCCGACTAC CGGTTCTCCG GAAACATCTG GGGTTATGCC
GAAGGGGACT GCTTCTTCCC CGGCTCCCCC ATCCTGGTGG TGGAAGGCAC CTTCGCTGAA
TGCGTGGTGC TGGAGACGCT GGCCCTGTCG ATCTACAACC ACGACTGTGC GATCGCTTCT
GCGGCCTCGC GAATGGTCAA CGCCGCGCAC GGGCGCCCGC TGATCGAAAT GGGTTCCCGC
CGCACTCACG AGGAAGCCGC GGTGGCCGCA GCCCGGGCCG CCTACCTGGC GGGGTTCAAC
GCCACCTCCA ACCTGGAAGC CGGGCGCCGC TACGGGATTC CCACCACTGG GACGAGCGCG
CACGCGTTCA CCCTGCTGCA CGACAGCGAG CGCCACGCGT TCACTGCCCA GCTCGAATCG
CTGGGGACGG GAACCACGCT GCTGGTGGAC ACCTACGAGG TGATGCGCGC GGTGCACACC
GCCGTGGAAC TGGCTGGTCC GGACTTGGGC GGGGTGCGGC TGGACTCCGG TGACCTGGAA
GAACTGGCGG TGAAGGTGCG CGCGCTGCTC AACGAGAAGG GGGCCGCGAA GACCCGCATC
ATCGTCACCG GCGACCTCGA CGAGTACTCC ATCCAAGCCT TGGCGATCGC CCCGGTCGAC
GGCTACGGGG TGGGCACCGC ACTGGTCACC GGGTCGGGGG TGCCGACCGC GTCCCTGGTG
TACAAGCTTG TGGCGCGCGC CCAGAGCGAC GACCCGGACG CGCCGCTGTC GCCGGTGGCC
AAACGTTCCG TGGGTAAACC CAGTAAGGGA GGGCGCAAGT GGGCGGTGCG CCGCTACGAC
GACAACGGGG TGGCGACGTC GGAGCGGGTC TTCGTGCATG AACCGGAGCT GACTCCGTTG
GAGCGGCCTC TGCTGGTTCC GCTGGTGCGC AACGGCGAGG TCGTGGGGCG TGAGCCGCTT
CAGGAAGCCC GGGAGCGGCA CGTCCGCTGC GTCGCGGAAC TTCCGGCGCC CGCGCGCCAA
ATGTCGCGGG GCGAACCCGC GATCCCCACC GTCTTCGAGC AGCGCCCAGC GCTCTGA
|
|---|
| Protein sequence | MTERWSSALL TDHYELTMVQ AALHSGAAHR RCVFEMFARR LPETRRYGVV AGTGRFLDAL
EHFRFTPEVL EFLERNGIVN SSTLSFLADY RFSGNIWGYA EGDCFFPGSP ILVVEGTFAE
CVVLETLALS IYNHDCAIAS AASRMVNAAH GRPLIEMGSR RTHEEAAVAA ARAAYLAGFN
ATSNLEAGRR YGIPTTGTSA HAFTLLHDSE RHAFTAQLES LGTGTTLLVD TYEVMRAVHT
AVELAGPDLG GVRLDSGDLE ELAVKVRALL NEKGAAKTRI IVTGDLDEYS IQALAIAPVD
GYGVGTALVT GSGVPTASLV YKLVARAQSD DPDAPLSPVA KRSVGKPSKG GRKWAVRRYD
DNGVATSERV FVHEPELTPL ERPLLVPLVR NGEVVGREPL QEARERHVRC VAELPAPARQ
MSRGEPAIPT VFEQRPAL
|
|---|
| |