| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2341 |
|---|
| Symbol | |
|---|
| ID | 3581222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2756206 |
|---|
| End bp | 2756721 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637686052 |
|---|
| Product | protein-tyrosine-phosphatase |
|---|
| Protein accession | YP_290397 |
|---|
| Protein GI | 72162740 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.0101078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC CCGAACCCCG TAACCCCTCT GGTCCGTACC GCATCTGCGT GGTGTGCCTC
GGCAACATCT GCCGTTCTCC GATGGCGGAG AAGATCCTGC TCACCGACCT GGCCCGCGCT
GGGCTCGCCG ACCGGGTCCA GGTAGATAGC GCAGGTACCG GCAACTGGCA TGTCGGGGCG
GACATGGACC GGCGTGCCGC CTCCACGCTG CGGAAGTACG GCTACCCGAC GGGGCATGTC
GCCCGCCAGT TCTCCCCCTC CTGGTTCCCG GAGCGGGACC TGATCCTGGC GATGGACACC
GACAACCTCG CGGACCTGGT CCGGCTCGCC CCGGACGAGG AGACCAAGGA CCGGATCCGC
CTGTTCCGCT CTTTTGCTCC CGGTGTAGGA CCCAACCCGG AGGTGCCTGA CCCGTACTAC
GGAGGTGAAG ACGGCTTCAT CACCGTGCTC ACCATGATCG AGGCCGCATC GAAAGGGCTC
GTCGGAGAAC TCACCGCGCT GTTCAGCGCG CGCTGA
|
|---|
| Protein sequence | MSLPEPRNPS GPYRICVVCL GNICRSPMAE KILLTDLARA GLADRVQVDS AGTGNWHVGA
DMDRRAASTL RKYGYPTGHV ARQFSPSWFP ERDLILAMDT DNLADLVRLA PDEETKDRIR
LFRSFAPGVG PNPEVPDPYY GGEDGFITVL TMIEAASKGL VGELTALFSA R
|
|---|
| |