Gene Tfu_2329 details

Gene Information

• Locus tag: Tfu_2329
• ID: 3581249
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 2741187
• End bp: 2743226
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637686040
• Product: superfamily protein I DNA/RNA helicase
• Protein accession: YP_290385
• Protein GI: 72162728
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0210] Superfamily I DNA and RNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAAACCC GCAGGTCGCA CTCCGCCCGC GAAAAATCTT CGGACATACA TTCGAAAATC 
CTGGAATTAA CCGCTCTGAC CTGGTGTTTT ACCAAGGTAA GAGGCCGTGT TCCCGCTCCC 
GTTTTCTCAT GCTTCGCGGT GGTTTGCCGA AATTCCCCGA AGCGCAGATT CCCAGAAGAA 
GCGGTGGCCG CCCGTCTTCT CCTCACGCGA TGTCCCACGT CAAACACGGT GACCGGAGGG 
AAACAGCCCG TGCCGCAACT CGCGATCGCC CCGACGTTCC TCAACGACTT CTCCCGCTTG 
GACAGCGGGG TCCAGCACAC GGTCCTGACC GCGGTGCGGT CCTACCTGGC CGGTGACAGC 
GGGCGCCTGC AGGCTGTCAC GGACGCCTCC GACCCGCGAG TGCGGGTACT GCAGATCAGC 
CCGGACTGGT CCGGTATCGT CGCCCCCTCC CAGGAAGGCT CCTACTGCCT GGTGGGGGTC 
CGCCGCCACG ACGAAGCAAT CTCCTATGCC CGCACCTACC GGGCTCCTGG CGGTCTGGAA 
CTGGACCTCG TGGAAATGCC TGCGCCGCCC GAGCCCGCCG AGGCCGCGGC TCCGGTGCGC 
GGCCCCGCAG ACCTGGCCGA CGCTCTCGCA CTGCCTTTCG CGGAGTGGCG GCTGAGCCTC 
GACCCGGACC ACCAGCGCCT GGCCACCGCA CATTTCGCCG GTTCGGCCCA GGTCACCGGC 
GGCCCCGGCA CGGGGAAGAC CGTGCTCGCC CTGCACCGTG CCGCGTACCT GGCTGAGCGG 
GACGCGGTGG AGTATGGCCC GGCAGCCCGG CCGAGCGTGC TGCTCACCAC GGGAAGCCGC 
ACCCTCGCGC AGACGCTCAG CGCCCAGTTG GACCGGTTGG TGTCCGCTCC GGATGTACGC 
CGCCGGATCG AGGTCGTCAC CGTGGACAGC CTGGCCCGCG GGGTGCTGAG CGAGAGCACG 
GGCATCCCGC CGGAGATCCT CAGCGATGAG GAGCTCGCGG AGCGGTGGCG CACCGCAGCG 
CGGATCGACG GCCTGCCGTT CTCCGGCCGT TTCCTCGTCG ACGAATGGCA GCAGGTGATC 
CTGGCCCAGG ACCTCACCTC GCTGGCCGAC TACATCCGCT GCGAGCGCAA CGGACGGATG 
CTGCACCTGG CACCTGAGTT CCGGCCCCAC GTCTGGGAGG CGATCCAGCG GTACACCGGG 
GCCATGCGCG CCGCAGGGGA ATGGTCCTAT CCCCAGGTGG CGCACGAAGC AGCACGGGCG 
CTGCGCACCC AAGGGCCGCG TTACCGGCAC ATCGTCGTCA CCGAATCCCA AGACCTGCAC 
CCGGCGCACT GGCGGCTGCT GCGCGCCGCG GTCCCCGAGG GGCCCGACGA CCTGTTCCTC 
CTCGGTGATC CGGCGCAGCG GCTCGTCGAC ACCCGGGTCT CGCTGGCGTC GCTGGGCATC 
AATGTCCGAG GCCGCGGCCA CCGGCTGCGG ACCAGCTACC GGGTCAGCCA GGAGATCCTC 
GACTGGGCAC TGCCGATTTT GGGCCGCAGC ACAGGCCCGG CCGCCGAAGG GTACGCCTCC 
GTGCTGCACG GACCCGAACC GGTGGTGCAG GGCTGCGCGA GCCGCGCGGA GGAGTGGACC 
GCGCTGAGCG AGTGGCTCCA GGCGCAGTTG GCGGCGGGCG CCCAGCCCGA GTCGATCGCG 
GTCGCCGGAC GCAACCAGTG GGTGGTGCGC ATCATCACGA AAGAACTCCA TGCGAACGGG 
ATCGCGACCG CCCCGCTGAA CTCTTCCGCC GACGTGGATG CGGTGCGGGT GGGCACGCTG 
CACGGGCTGA AGGGGCAGGA GTTCCGTTAC GTGGCCCTGG TGGGGCTGAG CGAACCGCTG 
CTGCCGCCCA AGGCCGCCAT CAGCGCCGCC GAAGGGGACC CGGTGGCCAT GGAGCAGGTC 
TACCAGGAGG AACGCCACCT GCTCTTCACG GCGTGCACGC GCGCCCGGGA CGCCCTGTAC 
GTCTCCTACG TGGGAGCGCC CAGCCAGTTG CTCCCGGAGT CGGTGCACCT GGCCCGTTGA 

 

Protein sequence

MQTRRSHSAR EKSSDIHSKI LELTALTWCF TKVRGRVPAP VFSCFAVVCR NSPKRRFPEE 
AVAARLLLTR CPTSNTVTGG KQPVPQLAIA PTFLNDFSRL DSGVQHTVLT AVRSYLAGDS 
GRLQAVTDAS DPRVRVLQIS PDWSGIVAPS QEGSYCLVGV RRHDEAISYA RTYRAPGGLE 
LDLVEMPAPP EPAEAAAPVR GPADLADALA LPFAEWRLSL DPDHQRLATA HFAGSAQVTG 
GPGTGKTVLA LHRAAYLAER DAVEYGPAAR PSVLLTTGSR TLAQTLSAQL DRLVSAPDVR 
RRIEVVTVDS LARGVLSEST GIPPEILSDE ELAERWRTAA RIDGLPFSGR FLVDEWQQVI 
LAQDLTSLAD YIRCERNGRM LHLAPEFRPH VWEAIQRYTG AMRAAGEWSY PQVAHEAARA 
LRTQGPRYRH IVVTESQDLH PAHWRLLRAA VPEGPDDLFL LGDPAQRLVD TRVSLASLGI 
NVRGRGHRLR TSYRVSQEIL DWALPILGRS TGPAAEGYAS VLHGPEPVVQ GCASRAEEWT 
ALSEWLQAQL AAGAQPESIA VAGRNQWVVR IITKELHANG IATAPLNSSA DVDAVRVGTL 
HGLKGQEFRY VALVGLSEPL LPPKAAISAA EGDPVAMEQV YQEERHLLFT ACTRARDALY 
VSYVGAPSQL LPESVHLAR