| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2291 |
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| Symbol | |
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| ID | 3579130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2693942 |
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| End bp | 2696062 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637686000 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal |
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| Protein accession | YP_290347 |
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| Protein GI | 72162690 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00302442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGGAA CCGAGACTCA CCCCGGGCCG GCGTCCTCCC CCCACACCAC CAGACCGCAC
CCCGCAGTCG AACCCGTGCT GTGCGTCGAC AACCTCCACG TCACCTTCCC CGCCACACCG
CACAGCCAGC CCGTCCCCGC GGTACGCGGC CTCAGCTACC AGCTCCACCG CGGAGAAATC
CTCGGTATCG TCGGCGAGTC CGGGTCCGGA AAAACAGCGG CCCTCCTCGC CGTGCTCGGC
CTCCTCCCCG ACCGCACGCG CATCACCGGA TCCATCCGAC TCCACGGGCG AGAACTCCTC
GGCCTCACCG AACGGGAACT CGCCGCGATC CGCGGAGCCA CTGTCGCCAC CGTGTCCCAA
GACCCGCTAG CCGCCCTCAC CCCCGTCCAC ACCGTCGGCT TCCACCTGGC AGAAGCCCTC
CGCCTCCACC AGCCCCGACT CTCCCGCGCC CAAGTCAAAG ACCGCATAGT CGCCCTCCTC
CGCCGGGTCG GCATCCCCGA CGCGGAACGC CTCCCCGACG CCTACCCCCA CGAACTCTCC
GGCGGAATGC GTCAACGCGT CATGATCGCC ATGGCGATCG CCAACAACCC CGACGTCATC
CTCTGCGACG AACCCACCAC AGCACTCGAC CCCACCGTCC AAATCCAGAT CCTCGACCTC
CTCGCCACCA TCCGCCGCGA TACCGGCGCT GCCATCGTCC TCGTCACCCA CGATCTCGGC
GTTGTCGCGG AAATCGCCGA CCGCGTTCTC GTCATGTACG CCGGACAGCC CGTAGAAACG
GGAACCGTGG CAGAGGTGTA CCGGCATCCC CGCACGCCCT ACACCATGGG CCTCCTCGCC
GCCCTGCCCC GCGTCGACAC CACCGACCCC GCGCCTCCCG CGCCCATCAG CGGCACCGCG
CCCCCACCCA CCGCCCCGCC CCGCGGGTGC CCCTTCGCAC CGCGCTGCCC CATCGCACTC
CCCGCATGCA CGGCTGAACC CCCCGCCCTG CAACCGGTGG ACCCCACCGC ACCCGCCGGC
CACCGTGCAG CCTGCCACCG CCTTGCCGAC ATCACCGCCC ACCAGTGGAC CGCGGCCGAC
CTCTACCCCC AGCCCGCACC CGCGTCCCCG ACCCGGCCGC CCCGAGACCA GCGGTCCACC
GTGCTCGCTG TCGACAGCCT CGTCAAACAC CACCCGCTGT ACCGGGGCAG CCTTTTCCGC
CGCCGGGCCG GGGCGATCCA CGCCCTCGAC GGGGTCAGCT TCGACCTCCG CGAACACGAA
ACCCTGGCCC TCGTCGGCGA GTCAGGAGCA GGAAAATCCA CCCTTCTCAC GGAAATCCTC
GAACTCGCCC GCCCCGCCCA CGGCCGGATC ACCGTCCTCG GCCACGACAC GGCCACCCTC
ACCCCGCAAC AGCGGTTCGC GCTCCGCCGC GACCTCCAAG TGGTCTTCCA AGACTCCTCG
TCCGCCCTCG ACCCGCGGAT GACCGTCGCC CAAATCGTGG CGGAACCCTT GCAGATCCAC
CGCTACCCGC GCCGCGACAT CCCCCACCGC GTGCGCGAAG TCCTCTCCCT CGTCGGCCTC
GACAGCTCCT TCACCCAGCG CCGCCCCGCC CAGCTTTCCG GTGGCGAACG CCAACGAGTC
GGCATCGCCC GAGCCCTCGC CCTCAACCCG AAACTGCTGC TGCTGGACGA ACCCGTATCA
GCGCTCGACG TCTCCGTGCA GGCAGGCATC CTCGCCCTGC TCACAGAACT CCAAGCCCGC
CTGGGACTGT CCTGCCTGCT CGTCACCCAC GACCTGGCGG TCGTCCGCCA CGTCGCCGAC
CGGGTCGCCG TCATGCACCT GGGGGTGATC GTCGAAATCG GCGCCACCGA ACCGGTCCTC
ACCGCGCCCC GCCACCCCTA CACCCAGGCG CTCCTGTCTG CCCTTCCCGT CCCCGACCCG
GACGCGGCAC ACCGCAACCG CACCGTGCTC TCCGGAGACC TGCCCAGCCC TGCCGACCCG
CCGGTGGGCT GCCGGTTCCA GACCCGCTGC CCCAAATTCC GCACCCTCAC CGACGCGGAG
CGGCGTATCT GCACCAGCCA GCCGCCCCCG CTGCGGCCAC TCGGCGACAC CGACCACCAG
GTCGCCTGCC ACCACGGTTA A
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| Protein sequence | MTGTETHPGP ASSPHTTRPH PAVEPVLCVD NLHVTFPATP HSQPVPAVRG LSYQLHRGEI
LGIVGESGSG KTAALLAVLG LLPDRTRITG SIRLHGRELL GLTERELAAI RGATVATVSQ
DPLAALTPVH TVGFHLAEAL RLHQPRLSRA QVKDRIVALL RRVGIPDAER LPDAYPHELS
GGMRQRVMIA MAIANNPDVI LCDEPTTALD PTVQIQILDL LATIRRDTGA AIVLVTHDLG
VVAEIADRVL VMYAGQPVET GTVAEVYRHP RTPYTMGLLA ALPRVDTTDP APPAPISGTA
PPPTAPPRGC PFAPRCPIAL PACTAEPPAL QPVDPTAPAG HRAACHRLAD ITAHQWTAAD
LYPQPAPASP TRPPRDQRST VLAVDSLVKH HPLYRGSLFR RRAGAIHALD GVSFDLREHE
TLALVGESGA GKSTLLTEIL ELARPAHGRI TVLGHDTATL TPQQRFALRR DLQVVFQDSS
SALDPRMTVA QIVAEPLQIH RYPRRDIPHR VREVLSLVGL DSSFTQRRPA QLSGGERQRV
GIARALALNP KLLLLDEPVS ALDVSVQAGI LALLTELQAR LGLSCLLVTH DLAVVRHVAD
RVAVMHLGVI VEIGATEPVL TAPRHPYTQA LLSALPVPDP DAAHRNRTVL SGDLPSPADP
PVGCRFQTRC PKFRTLTDAE RRICTSQPPP LRPLGDTDHQ VACHHG
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