Gene Tfu_2185 details

Gene Information

• Locus tag: Tfu_2185
• ID: 3581401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 2567315
• End bp: 2569249
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637685890
• Product: Elongator protein 3/MiaB/NifB
• Protein accession: YP_290241
• Protein GI: 72162584
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.972123
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGTCG AATCCGTCTT CCCACAGTTG GAAGCGTTGC TGCCCCACGT GCAAAAACCG 
ATCCAGTACG TGGGTGGTGA GCTGAACTCC GTCGTCAAGG AGTGGGACGA CGCAGAAGTC 
CGGTGGGCAC TGATGTACCC CGACGCCTAT GAGGTTGGCG TGCCCAACCA GGGGGTCCAG 
ATCCTCTACG AGATCCTCAA CGAACGCGAG GGTGTACTCG CCGAACGCGC CTACGCGGTC 
TGGCCCGACC TGGAGAAACT CATGCGCGAG CACGGGGTCC CGCACTTCAC CGTGGACTCC 
CACCGGCCGC TCGCCGCCTT CGACGTCCTC GGGGTCAGCT TCGCCAGCGA GATGGGCTAC 
ACCAACCTGC TCACTGCGCT GGACTTGGCG GGCATCCCGC TGCACGCGGT GGACCGCACC 
GACGAGCACC CGATCGTGCT GGCGGGCGGA CACGCCATGT TCAACCCGGA GCCTATCGCC 
GACTTCCTGG ACGCCGTGGT CCTGGGGGAC GGCGAGGAGA TCGCGATCGC GATCACCGAA 
CTCATCCGGG AGTTCCGCCG GGAAGGGTCC CCGGGGGGAC GCGACGAGCT GCTGTCCCGC 
CTGGCCGCCA CCGGCGGGGT GTACGTGCCC AAGTTCTACG ACGTCACCTA CCTTCCGGAC 
GGGCGGATCG AAAAGTACGT GCCCAACCGT CCCGGCGTCC CGTGGCGGGT GCAGAAGCAC 
ACCGTCATGA ACCTCGACGA CTGGCCCTAC CCGAAGAACC CGATCGTTCC GATCGCCGAG 
TCCGTCCACG AGCGCTACAG CGTGGAGATT TTCCGTGGCT GCACGCGCGG CTGCCGGTTC 
TGCCAGGCCG GAATGATCAC CCGCCCGGTG CGGGAGCGCA GCGAGAAGGC GATCGCCGCC 
ATGGTCGACC ACGGGCTGCG CTCCTCGGGA TTCCAGGAGG TCGGCCTGCT CTCCCTGTCG 
AGCGCCGACC ACAGCCAGAT CAGCGAGATC ACCAAGAACC TCGCGGACCG TTACGAAGGC 
ACCCACACCG GGCTCTCGCT GCCCTCCACC CGGGTCGACG CCTTCAATAT CGACTTGGCC 
AACGAGCTGA CCCGTAACGG ACGCCGCTCC GGGCTCACGT TCGCACCCGA GGGCGGCAGC 
GAGCGGATGC GTCGGGTCAT CAACAAGATG GTCACCGAAG AGGACCTGAT CCGCACGGTC 
ATCGCGGCCT ACGCGGCGGG GTGGCGCCAG GTCAAGCTGT ACTTCATGTG CGGGCTGCCC 
ACCGAGGAGG ACGCCGACGT CCTCGCCATC GCCGACCTCG CCCGCAAGGT CATCAAGACG 
GGGCGTGAGG TCACCGGGCG TCGTGACATC CGCTGCACGG TGTCCATCGG CGGTTTCGTC 
CCGAAACCGC ATACCCCCTT CCAGTGGGCG GGTCAGGCCC CCCACGAGGT CGTCGACAGC 
CGACTGCGGA AGCTGCGGGA CGCCCTGCGC TCCGACCGGG AGTACGGCAA GTCCATCGGG 
CTGCGCTACC ACGAGGGACG GCCGTCCATC ATCGAAGGCC TCCTCTCCCG AGGCGATCGC 
CGGCTGTGCC GGGTCGTGGA GCGGGTGTGG CGCGAAGGCG GCCGTTTCGA CGGGTGGAGC 
GAGTACTTCT CCTACGAGCG CTGGGTGAAG GCCGTCGAAG AAGAGCTGGC CGACGAGCCC 
GTGGACTTGG ACTGGTACAC GGTGCGCGAG CGCGATGCCG ATGAGGTGCT GCCCTGGGAC 
CACCTGGACG CCGGACTGGA TCGGGAGTGG CTCTGGCAGG ACTGGCAGGA CGCCTTGCAC 
GGCGAGGAAG CGGTGGAGGT CGACGACTGC CGCTGGAGCC CCTGCTACGA CTGCGGGGTC 
TGCCCGAGCA TGGGAACCCA GATCCAGACC CACGGCGTTC CGGGACGCAA ACTGCTTCCG 
CTGAGCGTGG TATGA 

 

Protein sequence

MTVESVFPQL EALLPHVQKP IQYVGGELNS VVKEWDDAEV RWALMYPDAY EVGVPNQGVQ 
ILYEILNERE GVLAERAYAV WPDLEKLMRE HGVPHFTVDS HRPLAAFDVL GVSFASEMGY 
TNLLTALDLA GIPLHAVDRT DEHPIVLAGG HAMFNPEPIA DFLDAVVLGD GEEIAIAITE 
LIREFRREGS PGGRDELLSR LAATGGVYVP KFYDVTYLPD GRIEKYVPNR PGVPWRVQKH 
TVMNLDDWPY PKNPIVPIAE SVHERYSVEI FRGCTRGCRF CQAGMITRPV RERSEKAIAA 
MVDHGLRSSG FQEVGLLSLS SADHSQISEI TKNLADRYEG THTGLSLPST RVDAFNIDLA 
NELTRNGRRS GLTFAPEGGS ERMRRVINKM VTEEDLIRTV IAAYAAGWRQ VKLYFMCGLP 
TEEDADVLAI ADLARKVIKT GREVTGRRDI RCTVSIGGFV PKPHTPFQWA GQAPHEVVDS 
RLRKLRDALR SDREYGKSIG LRYHEGRPSI IEGLLSRGDR RLCRVVERVW REGGRFDGWS 
EYFSYERWVK AVEEELADEP VDLDWYTVRE RDADEVLPWD HLDAGLDREW LWQDWQDALH 
GEEAVEVDDC RWSPCYDCGV CPSMGTQIQT HGVPGRKLLP LSVV