| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2183 |
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| Symbol | |
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| ID | 3581399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2563229 |
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| End bp | 2565955 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685888 |
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| Product | ribonuclease E and G |
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| Protein accession | YP_290239 |
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| Protein GI | 72162582 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0295776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAGA ACGAGCCCAA CAACGGTGTG GATAGCACCG AGGGGACAAC TGAAATAGAG
ACAAGCACAC GATCGAACGG TTCGACCGTC GTCGGCATGT CCGGTACGGT GCGCCTGGCC
CAGCCGGTAC GCCGAGGCCG AGCCGCAAGC AGGCCCGCGG GACCACCGCC CGAACCCGAC
CCGATCCCGG TGACGGCGCG GACGACCGTG GCTGCCACCT CTATCGAGCT GGTCACTGAC
CCGGCTCCGT CGAAGTCAGC CGCCGAGGAC ACGGCAGAGG AGGAGCCGAA ACGGCGGAGT
CGTAAGACCA CGGCCCGTAC CTCGCGCACC CGTACCCGGA GCAGGACAGC GACCACCGAC
GATACCGAGC CGACCGGCCA GGACACGACC CCAGGAGCGG AACGGAGCAG CGGGGAGAGC
GCCGCGCAGG CCGCGCCCGC GGGCAACACT CTCGCGCCCG CGGCCCAGGA CACGCGTCCT
GCTGACCCTA GCGCGGTAGC CGCCGTCACC TTCCAACCGC CCATGGTGGT CTTCCAACCG
CCGGTCGTGG AGTCGGTAGA GCCGGACAGC CCGCAGGACG CGGGGGAGGA GCTGGACGAG
GCCGAGGATC TCAGCGCGGA GATCGAACTG GCGGTGGAGG AGCGCCCCAC CCGCCGCAGG
CGGCGGAGGA GGCGCAACCG GTCCCGCAGC GGGGACGACG GCGAGGCCGC TGATACCAGC
GACACCACGG ACGACGCGGA GACGACGGCC GACGAGACCG AGAAAGGCAG CGCGGGGGAG
GCACCTGCCG CTGCCGCCGC GGACACGACC GAGGAGACCG AGGCGACGAC GACCGGTACC
CGGCGTCGCC GTCGGCGCCG CCGCCGTTCC GGGGTAGAGG TCACCACCGA GCCGGAAGCC
GATGATCAGT CCAGTACGGC GGCCCGCACT CGTCCCGCCC GCGCTGAACG GCCGATCGAG
GAAGAAGTGC AGGCGGTCCG CGGGTCGACG CGTTTGGAAG CCAAGCGGCA GCGCCGTCGG
GAAGGACGGG AGCAGGGACG CCGCCGCCCC ACCATCATCA CCGAGTCGGA GTTCCTGGCC
CGCCGCGAGT CCGTCAAACG TGACCTGATC GTCCGCCGGA TCGGGGAACG CACCCAGATC
GCCGTGCTCG AAGACAACGT GCTCGTCGAG CACTACGTGG ACCGTGCCGA CCACAAGTCG
TACGTCGGCA ACGTCTACCT GGGTCGGGTG CAGAACGTGC TGCCGTCGAT GGAGGCGGCC
TTCGTCGACA TCGGCAAAGG GCGCAACGCA GTACTGTACG CGGGCGAAGT CAACTGGGAC
GCCACCGGCC TGGAAGGCCA GCCCCGCCGG ATCGAGTCGG TGCTCAAGTC CGGCCAGTCT
GTGCTGGTGC AGGTCACCAA AGACCCGGTC GGGCACAAAG GTGCCCGGTT GACCAGCCAG
ATCAGCCTGC CCGGCCGCTA CTTGGTGTAT GTGCCTGACG GCTCGATGAC GGGCATCAGC
CGCAAGCTGC CCGACAAGGA ACGGGCCCGG CTCAAGCAGA TCTTGAAGAA GGTCATGCCC
AACGGGGCCG GCGTGATCGT GCGTACCGCG GCAGAGGGGG CCAGCGAAGA GGAGCTGGAG
CGCGACATCG CCCGCCTGTC GCAGCAGTGG GAGTCCATCA AGCGCAAGGC GAAGTCAGCG
ACCGCCCCGG CGCTCCTCAG CAGCGAACCA GACCTCACCA TCCGCGTGGT CCGGGACATT
TTCAACGAAG ATTTCTCCAG CCTCGTCGTC TCCGGCGACG ATGCGTGGGA GACCATCCGC
GACTACGTCA ACCAGGTCGC CCCACACTTG GCGGACCGTC TGTCGCACTG GACCGAAGAC
CGCGACATCT TCGAGGCCTA CCGCATCGAT GAGCAGATCG CCAAGGCGCT GGAGCGCAAA
GTGTGGCTGC CCAGCGGCGG TTCGCTGATC ATCGACCGCA CCGAGGCGAT GACGGTCATC
GACGTCAACA CCGGCAAGTT CACCGGCCAG GGCGGGAACC TTGAGGAGAC GGTCACCAAG
AACAACCTCG AGGCGGCCGA GGAGATCGTG CGCCAGCTCC GACTGCGGGA CATCGGCGGC
ATCATCGTCA TCGACTTCAT CGACATGGTG CTGGAAAGCA ACCGCGACTT GGTGCTACGC
CGCATGCTGG AATGCCTGTC CCGGGACCGC ACCAAGCACC AGGTGGCCGA GGTCACGTCG
CTGGGCCTGG TTCAGATGAC GCGCAAGCGG GTCGGCCAAG GGTTGCTAGA GGCTTTCTCG
CACACCTGCG AGCACTGCAA CGGCCGCGGC CTCATCCTGC AGACCGATCT GCTCGAGTCC
AAGTCCGGCG GGCGCAAGAA GAAGAACAAG AACAACGGCG CGAATAAGAA CGGCGCCGGC
GCGGAGAAAA CCTCGGCAGA CCAGGGCAAG GCCACGGACA AGGCGCGGGC CGGCGGAGAC
GCCGAGACTG CAGCGCAGGC CGAGGCTAAC GGCGGTGCCA CGCGTACCGC CAAAGATGTT
GCGGGATCGC CCGAGAAACA GGAGGATTCG GTTCCATCCA TCTCGGAGTC CGGCAGCGAG
TCCTCCGCGC AGGCGAACGC TGTCCCGGAG ACGAAGGAGG CTGCTGAACA GCCAGCCGAG
ACAGTGGCGG AACGCCCCCG GCGCCGCCGG ATCCGGCGCA GGGCCGGGGT GGTCGTCTCC
GAGACGGCGG TGGCTGAAGC CGGATGA
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| Protein sequence | MLENEPNNGV DSTEGTTEIE TSTRSNGSTV VGMSGTVRLA QPVRRGRAAS RPAGPPPEPD
PIPVTARTTV AATSIELVTD PAPSKSAAED TAEEEPKRRS RKTTARTSRT RTRSRTATTD
DTEPTGQDTT PGAERSSGES AAQAAPAGNT LAPAAQDTRP ADPSAVAAVT FQPPMVVFQP
PVVESVEPDS PQDAGEELDE AEDLSAEIEL AVEERPTRRR RRRRRNRSRS GDDGEAADTS
DTTDDAETTA DETEKGSAGE APAAAAADTT EETEATTTGT RRRRRRRRRS GVEVTTEPEA
DDQSSTAART RPARAERPIE EEVQAVRGST RLEAKRQRRR EGREQGRRRP TIITESEFLA
RRESVKRDLI VRRIGERTQI AVLEDNVLVE HYVDRADHKS YVGNVYLGRV QNVLPSMEAA
FVDIGKGRNA VLYAGEVNWD ATGLEGQPRR IESVLKSGQS VLVQVTKDPV GHKGARLTSQ
ISLPGRYLVY VPDGSMTGIS RKLPDKERAR LKQILKKVMP NGAGVIVRTA AEGASEEELE
RDIARLSQQW ESIKRKAKSA TAPALLSSEP DLTIRVVRDI FNEDFSSLVV SGDDAWETIR
DYVNQVAPHL ADRLSHWTED RDIFEAYRID EQIAKALERK VWLPSGGSLI IDRTEAMTVI
DVNTGKFTGQ GGNLEETVTK NNLEAAEEIV RQLRLRDIGG IIVIDFIDMV LESNRDLVLR
RMLECLSRDR TKHQVAEVTS LGLVQMTRKR VGQGLLEAFS HTCEHCNGRG LILQTDLLES
KSGGRKKKNK NNGANKNGAG AEKTSADQGK ATDKARAGGD AETAAQAEAN GGATRTAKDV
AGSPEKQEDS VPSISESGSE SSAQANAVPE TKEAAEQPAE TVAERPRRRR IRRRAGVVVS
ETAVAEAG
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