Gene Tfu_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_2170 
Symbol 
ID3580391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand
Start bp2545538 
End bp2545942 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content63% 
IMG OID637685875 
ProductIojap-related protein 
Protein accessionYP_290226 
Protein GI72162569 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.186283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCTA CGGAACGGAC TGTTGAACTT GTCACCATTG CGGCCACCGC CGCGGCCGAC 
AAACTCGCGC AGGACATTGT TGCCTACGAT GTCAGCGATC AGCTCGTCAT CACTGACGCT
TTCCTCTTGT GCTCCGCGCC CAACGACCGC CAGGTCAGGG CGATCGTAGA CGAGATCGAG
GAACGCCTGT ATCGGCAGGC GAAAGCCAAG CCGGTGCGCC GGGAAGGCGA ACACGAGGGC
CGTTGGGTAC TGCTGGACTA CGTTGACCTC GTCGTGCACG TCCAGCACGA AGAGGAGCGC
GGTTACTACA GTTTGGAGCG GCTGTGGAAG GACTGCCCCC AGATCGAGCT GCCTCAGGCG
GCTCAGGGCG TCGACCACAC CGCGAACGGC TCGAGCAGTG AGTGA
 
Protein sequence
MTATERTVEL VTIAATAAAD KLAQDIVAYD VSDQLVITDA FLLCSAPNDR QVRAIVDEIE 
ERLYRQAKAK PVRREGEHEG RWVLLDYVDL VVHVQHEEER GYYSLERLWK DCPQIELPQA
AQGVDHTANG SSSE