Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2167 |
Symbol | |
ID | 3580386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2540053 |
End bp | 2542173 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637685870 |
Product | helicase c2:DEAD/DEAH box helicase, N-terminal |
Protein accession | YP_290223 |
Protein GI | 72162566 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGAACCC CCGCGGGAGA CCGCCCTGGC TCTCCTGTGG ACAACCGGCC GAACCTGCCG CACCGACCCG GTACTGTCAG GGGCGTGTCT GATCTTCCCG ACGTCGACGA GCTCCTCGAC GCGGCCGTGC GCGCCCTCAA CGGCACCCGG CGCGACGGCC AGGCGACCAT GGCCCGCTCG GTGGCCGCAG CGATCGACAG CCGCGAACAC CTCGTCGTGC AGGCCGGCAC CGGAACAGGA AAATCCCTGG GCTACCTGGT TCCGGCACTG CGCCACGCGG TCGCCGCCAA CGCCACGGTT GTGGTCTCCA CCGCCACCAT CGCGCTGCAG AACCAGCTCA TCGGACGCGA CCTGCCGCGG CTCACCGAGG CACTCGAACC GCTGCTGGGC CGCCGTCCCG TCTACGCGAT CCTCAAAGGA CGGCGCAACT ACCTGTGCCG CTACCGCCTC TCCCAGGCAG CGACAGGTCC GGAAGAAGCT GAACTGTTCG ACCCGCACCT GCTGTCCTCG CTCGGCCGCC AAGTGCGCCG GCTCCACGAA TGGGCGGAGG AGACCCTCAC CGGGGACCGC GACGACCTCA CCCCGGGGGT GAGCGATCTG GCCTGGCGGC AGGTCTCCGT GGGAGCCAAC GAGTGCATCG GGCCCCAGAT GTGCCCGGTC AGCGACGACT GTTTTGCGGA GCTCGCCCGG GCCGAGACCA TCGGCGCGGA CCTCGTCGTC ACCAACCACG CCCTGCTCGC TATCGACGCT GTCCAGGGCT ACCGGCTGCT GCCCGACCAC GACCTGCTCA TCGTTGACGA AGCGCACGAG CTCGTCGACC GGGTCACCTC CGTGGCGACT GGGGTGCTCA GTGACCGGAG CATCAGCCTT GCGGCGAAGC GGGCCGCCCC GGTCTGTGAC GTGGAACTCA CCGAACGCCT CGCAGAGACC GCTGACGGGT TGGCGTTGAT GCTCGCCGAC ACCCCGCCGG GCCGTCTCGA CCATCTGCCG GATCCGCTGG CCACCGCCGT AGCCGCAGTC CGGGACGCCG CCCACGCCTG CCTTTCCGCG CTGCCCGAGC CGCCCCGGGA CGACCCGCAC GCCGCCAGCG CCCGCCGGCT CGCCCTCGCC GGCCTCGAAG AAGTCCACTG CACCGCCGAA CGGATCCTCC TCTGCGTCCA GCAGCCCCTC CGGGACCGGC AGGACGTGGT GTGGTTCGCG CGCGGCGCAC GGCAGACCCC CGGACTTCGC ATCGCTCCCC TGGCTGTCAA CCGGACCCTG CGCCAGGCCC TGTTCACCGA GCGCACCACG GTGCTGACCT CCGCCACCCT CGCTCTCGGC GGCTCCTTCG ACCTGATGGC CCGGCAGTGG GGACTCGGCC CTCTGCCCGA TCATGACCCG GCAGAGGCAG CAGAGCCCGC GGAAACCACT GCCACGCCCT CGGCCGAACC CAGCCCGCTC CGGTGGCGCG CGATCGACGT GGGCTCACCG TTCAACCACG CCCGCAGCGG CATCCTCTAC ATCGCCACCC ACCTGCCCCC GCCGGGCCGG GAGAGCCTCC ACCCCGAATA CCTCGACGAG ATGGCGGAAC TCATCGACGC GGCAGGAGGG CGCACCCTCG GCCTGTTCTC CTCCACCCGG GCAGCCGTGC ACGCCGCAGA AGAACTCCGG GAACGCCTGC CTTACCCGAT CCTGTGCCAG GGGGACGACT CCACCGGCCA CCTCGTCCAG CAGTTCGCTG CAGACGAGGC CACCTGTCTG TTCGGCACCT TGTCACTGTG GCAGGGCGTG GATGTCCCGG GACCGGCGCT GCAACTGGTC ATCGTGGACC GCATCCCCTT CCCCCGGCCC GATGACCCGC TGGCCTCGGC CCGGCAGCGC GCGATCGGTG CACAAGGAGG GAACGGGTTC CTCGAAGTCG CGGCTACCCA TGCCGCGCTG CTCCTCGCCC AAGGCACCGG GCGGCTCTTG CGGTCCGTCC ACGACAAAGG GGTGGTCGCG GTCCTCGACC CGCGGCTGGC CACCGCCCGC TACGGGGCGT TCCTCCGCGC CTCCCTGCCC CCGTACTGGG GAACCACCGA CCCCCAAGTG GCCCGGGCGG CGCTGCGGAG ACTCCACGAG GCAGCGTCCC GCGCGGCCTG A
|
Protein sequence | MRTPAGDRPG SPVDNRPNLP HRPGTVRGVS DLPDVDELLD AAVRALNGTR RDGQATMARS VAAAIDSREH LVVQAGTGTG KSLGYLVPAL RHAVAANATV VVSTATIALQ NQLIGRDLPR LTEALEPLLG RRPVYAILKG RRNYLCRYRL SQAATGPEEA ELFDPHLLSS LGRQVRRLHE WAEETLTGDR DDLTPGVSDL AWRQVSVGAN ECIGPQMCPV SDDCFAELAR AETIGADLVV TNHALLAIDA VQGYRLLPDH DLLIVDEAHE LVDRVTSVAT GVLSDRSISL AAKRAAPVCD VELTERLAET ADGLALMLAD TPPGRLDHLP DPLATAVAAV RDAAHACLSA LPEPPRDDPH AASARRLALA GLEEVHCTAE RILLCVQQPL RDRQDVVWFA RGARQTPGLR IAPLAVNRTL RQALFTERTT VLTSATLALG GSFDLMARQW GLGPLPDHDP AEAAEPAETT ATPSAEPSPL RWRAIDVGSP FNHARSGILY IATHLPPPGR ESLHPEYLDE MAELIDAAGG RTLGLFSSTR AAVHAAEELR ERLPYPILCQ GDDSTGHLVQ QFAADEATCL FGTLSLWQGV DVPGPALQLV IVDRIPFPRP DDPLASARQR AIGAQGGNGF LEVAATHAAL LLAQGTGRLL RSVHDKGVVA VLDPRLATAR YGAFLRASLP PYWGTTDPQV ARAALRRLHE AASRAA
|
| |