| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_2128 |
|---|
| Symbol | |
|---|
| ID | 3581971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 2487384 |
|---|
| End bp | 2490107 |
|---|
| Gene Length | 2724 bp |
|---|
| Protein Length | 907 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637685831 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_290184 |
|---|
| Protein GI | 72162527 |
|---|
| COG category | [C] Energy production and conversion
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming)
[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.505771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAGTCAT ACCCCAAGCA CTGGGAAGCG GATGTGGTGC TGACCGACGG CGGCACCGCG
CACATCAGGC CGATCACTCC TGACGATGCC ACCCTCCTCC AGGAGTTCCA CTCTCGGCTC
TCCCCTGAGA CGATCTACTA CCGGTTCTTC GCTCCCTACC CGAAGCTCTC CTCCCGCGAC
GTCGAGAGGT TCACCAAGGT CGACTACGAG GACCGGGTAG CCCTGATTGC CACGATCAGC
GACGCCATGG TCGCGGTGGT CCGCTACGAC AAGGTGGGCC AGGACGAGGC CGAGGTCGCC
TTCGTCGTCG AAGACGCCCA CCAGGGCCGC GGGCTCGCCT CCGTCATGCT GGAGCACATT
GCTGCCGCCG CCCGGGAACG CGGCATCCGC CGCTTCATCG CCGACGTCCT GCCGGAGAAC
CGGCGGATGA TCAACGTGTT CCGGGAAGCC GGCTACACCG CGCAGCAGAC CTTCGACGAA
GGCGTCATCC GCCTCACCCT CGACCTCGAA CCCACCGAGG TCTCCTTGGA AGTCATGCGC
GCCCGCGAAC AGCGCGCCGA GTCGCGTTCC ATCGCCCGCC TGCTGTTCCC CAAGTCCGTC
GCGGTGATCG GTGCCAGCCG CACCGCGTAC ACCATCGGCC AGACCGCGCT GCGCAACCTC
CTCAACGGGG ACTTCCGGGG ACCGGTCTTC CCCGTGCACC CCGAAGCCAC AGCGGTTGCG
GGGGTCAAGG CATACCCCAG TGTCCTCGAC ATCCCCGACC CGGTCGACCT CGCCATTGTC
GCGGTCCGCG CCGACATGGT CGCGGACGTG GTCGACCAGT GCGCCCGCAA AGGCGTCCAC
GGACTTGTCG TGGTCAGCTC CGGGTTCGGC GAGACCGGGC CCGAAGGCAA GAAACGGCAG
GACGAACTGG TCCGGGCCGC CCGCGCCGCC GGTATGCGTG TCGTGGGCCC CAACTGCCTG
GGGGTAGCCA ATACCGACCC GAAGGTCTCC CTCAACGCTA CGCTCTCCCC CAACCTGCCC
CCACGGGGCC GGATCGGCTT CTTCTCCCAG TCCGGTGCCC TGGGCCGGGC CATCCTGGAA
CGGGTCGCCC AGCGGGGCCT GGGCTTGTCC ACCTTCGTGT CCGCGGGCAA CCGCGCGGAC
GTCTCCGGCA ACGACCTGCT GCAGTACTGG GAAGAAGACC CGGCCACCGA AGTCGTCCTG
CAGTACCTGG AGTCCTTGGG TAACCCCCGC AAGTTCACCC GCCTGGCGCG CCGCCTGGCC
CGCCGGAAGC CCGTAGTCGT CGTCCGCAGC GGCGGCTCCG TCCGCGGCGT GCCGCGAGGA
CACGCCGCAG GCACCCTCTC CCTGCCCGAC TACGCGGTGA CCTCCCTATT CGAACAGTCC
GGCGTGGTCC GGGTCGAGGA CATCACCCAG ATGTTCGACG TCGCGCAACT GTTCGCCTAC
CAGCCGCTGC CGAAAGGCCC CCGGGTCGGC ATCATCGGCA ACTCCGCGGC CTTGGAGCTG
CTGGTCAAGG ACGCCTGTGT CCGTGCCGGA CTGCACCCCC TCGAACCCGT AGACCTCGGC
CCCAACGCCA CCGAGCGCGA CTTCGCGGAA GCGCTGGACG CGGCCCTCGC CGACGACGGA
GTGCACTCCC TGGTCGTGGT CTTCATCCCG GCCCTGGCCC CCATCTCCAG CGGCGTGGCC
GAAGTCATGC GAGAGCGCTC GGCGCGGGCC ACGAAACCCA TCGTCACCGC CTACCTGGGC
CATCAGGGTG TTCCGGAAGA GCTCCGCCTG GTCGGGGAAG GCGGGGAGAC CCTCCGCGGC
TCTGTGCCCT CCTACCCGGC CCCGGAAGAC GCGGTCCGCG CCCTGGCACA CGCCACCCGC
TACGCCCTGT GGCGGCAGCG CTCCCACGGA CGCCACCCCG AGCTCGCCGA CATCGACACG
GCCCGGGCCC GTGCCGTGAT CACCCGTTCC CTCGCCGAAG CGAAAAAAGC CGGCACCGCC
GACCACTCGG TCTGGTTCAC GAGCGAACCC GTGCTCAGCG ACGAAGGAGC GCTCCCCCCG
GAGACCGCCC GGGAACTGCT CGGCTGCTAC GGCATCCCTG TCGAGCCGTA CATTCCGGTG
CACTCCGCAG ACGAGGCAGC TGCCGCAGCG GAACAGCTCG GCTATCCGGT CGTAGTCAAA
GCCAACTCCC CGGACCTGCG GCTCCGCGCC GGCGGACGCG GTATCCGCCT GGAGCTGCTC
TCCGCCGAGG ACGTGCGCAC TTCCTTCACG TCGCTCCACG AACGGCTCGG CGACGAGGCG
ATGCTCGTCG TGCAGCGGAT GGTCACCCCC GGCGTGCCCA CGCTCATCCG CGCGGGAGAA
AACCCCTCCT TCGGCCCGGT GATCGCTTTC GGGCTCGCCG ATGTCACCGC CGAACTCCTC
GACGACCGCG CCTACCGGCT CGCGCCGCTC ACCGACGCCG AGGCCGCCGA CCTGGTCCGC
GCGGTCCGCT CCTCCCCGCT GCTGTTCGGC CTGCCCGCGG GCACCTCGTC ACTCGCCGAC
CAGCCCGACG TGGAAGCCTT GGAAGAGGTG CTGGTCCGCG TCTCCCGCAT GGTTGATGCG
CTCCCCGACG TCGCCTACGT CGAACTCGAC CCGGTCATCG TCAACTCCAC CGGAGCCCAC
GTCATGGGGG CGCGAGTGTG GCTGCGGGAA GCCCCCGAGG TGCGGCCCGA CTCTGGACCG
CGGCGCCTGC GCGTGCCGTT TTAA
|
|---|
| Protein sequence | MQSYPKHWEA DVVLTDGGTA HIRPITPDDA TLLQEFHSRL SPETIYYRFF APYPKLSSRD
VERFTKVDYE DRVALIATIS DAMVAVVRYD KVGQDEAEVA FVVEDAHQGR GLASVMLEHI
AAAARERGIR RFIADVLPEN RRMINVFREA GYTAQQTFDE GVIRLTLDLE PTEVSLEVMR
AREQRAESRS IARLLFPKSV AVIGASRTAY TIGQTALRNL LNGDFRGPVF PVHPEATAVA
GVKAYPSVLD IPDPVDLAIV AVRADMVADV VDQCARKGVH GLVVVSSGFG ETGPEGKKRQ
DELVRAARAA GMRVVGPNCL GVANTDPKVS LNATLSPNLP PRGRIGFFSQ SGALGRAILE
RVAQRGLGLS TFVSAGNRAD VSGNDLLQYW EEDPATEVVL QYLESLGNPR KFTRLARRLA
RRKPVVVVRS GGSVRGVPRG HAAGTLSLPD YAVTSLFEQS GVVRVEDITQ MFDVAQLFAY
QPLPKGPRVG IIGNSAALEL LVKDACVRAG LHPLEPVDLG PNATERDFAE ALDAALADDG
VHSLVVVFIP ALAPISSGVA EVMRERSARA TKPIVTAYLG HQGVPEELRL VGEGGETLRG
SVPSYPAPED AVRALAHATR YALWRQRSHG RHPELADIDT ARARAVITRS LAEAKKAGTA
DHSVWFTSEP VLSDEGALPP ETARELLGCY GIPVEPYIPV HSADEAAAAA EQLGYPVVVK
ANSPDLRLRA GGRGIRLELL SAEDVRTSFT SLHERLGDEA MLVVQRMVTP GVPTLIRAGE
NPSFGPVIAF GLADVTAELL DDRAYRLAPL TDAEAADLVR AVRSSPLLFG LPAGTSSLAD
QPDVEALEEV LVRVSRMVDA LPDVAYVELD PVIVNSTGAH VMGARVWLRE APEVRPDSGP
RRLRVPF
|
|---|
| |